C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: small nuclear ribonucleoprotein polypeptide C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000474635 SNRPC-004 ENSG00000124562 9606 + 6:34757912-34773532 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000474635
Transcript ID Bladder
ENST00000474635 4.996±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000258 CIL_000258_0001 CGP 6:34587288-34773794
CIL_000259 CIL_000259_0001 CGP 6:34757406-34883138

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071006 Snrpc-001 protein_coding Mus_musculus 0 462
ENSMUST00000173338 Gm2991-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000137581 Snrpc-002 retained_intron Mus_musculus 0 418
ENSMUST00000175770 Gm8974-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000058951 Gm8849-201 pseudogene Mus_musculus 0 403
ENSMUST00000189108 RP24-554B1.8-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000120976 Snrp1c-ps2-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000191160 RP23-298I7.3-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000121668 Gm13555-001 processed_pseudogene Mus_musculus 0 274

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