| Transcript ID | Bladder | Liver |
|---|---|---|
| ENST00000374017 | 1.390±0.00 | 0.824±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | small nuclear ribonucleoprotein polypeptide C | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000374017  |
SNRPC-002 |
ENSG00000124562 |
9606 | + |
6:34757554-34773794  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000258 | CIL_000258_0001 | CGP | 6:34587288-34773794 |
| CIL_000259 | CIL_000259_0001 | CGP | 6:34757406-34883138 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000387 | IEA | spliceosomal snRNP assembly |
| GO:0000398 | IEA | mRNA splicing, via spliceosome |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0005634 | IEA | nucleus |
| GO:0005685 | IEA | U1 snRNP |
| GO:0008270 | IEA | zinc ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000071006
|
Snrpc-001 | protein_coding | Mus_musculus | 0 | 645 |
|
ENSMUST00000173338
|
Gm2991-001 | processed_pseudogene | Mus_musculus | 0 | 562 |
|
ENSMUST00000175770
|
Gm8974-001 | processed_pseudogene | Mus_musculus | 0 | 549 |
|
ENSMUST00000058951
|
Gm8849-201 | pseudogene | Mus_musculus | 0 | 542 |
|
ENSMUST00000189108
|
RP24-554B1.8-001 | processed_pseudogene | Mus_musculus | 0 | 505 |
|
ENSMUST00000137581
|
Snrpc-002 | retained_intron | Mus_musculus | 0 | 414 |
|
ENSMUST00000191160
|
RP23-298I7.3-001 | processed_pseudogene | Mus_musculus | 0 | 374 |
|
ENSMUST00000120976
|
Snrp1c-ps2-001 | processed_pseudogene | Mus_musculus | 0 | 346 |
|
ENSMUST00000121668
|
Gm13555-001 | processed_pseudogene | Mus_musculus | 0 | 274 |
