C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Meis homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000272369 MEIS1-001 ENSG00000143995 9606 + 2:66435400-66573869 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyENST00000272369
Transcript ID Heart Kidney
ENST00000272369 0.590±0.00 0.551±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ET CIL_0008ET_0001 VISTA 2:65870410-66471811
CIL_00085V CIL_00085V_0001 VISTA 2:65983424-66584663
CIL_0007JR CIL_0007JR_0003 UCNEbase 2:66138106-68180953
CIL_0008VO CIL_0008VO_0001 VISTA 2:66222407-66823799
CIL_000949 CIL_000949_0001 VISTA 2:66235383-66837956
CIL_00094L CIL_00094L_0001 VISTA 2:66397571-66998983

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001525 IEA angiogenesis
GO:0002089 IEA lens morphogenesis in camera-type eye
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003705 IEA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0030097 IEA hemopoiesis
GO:0035855 IEA megakaryocyte development
GO:0043565 IEA sequence-specific DNA binding
GO:0045638 ISS negative regulation of myeloid cell differentiation
GO:0045665 IEA negative regulation of neuron differentiation
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IEA protein heterodimerization activity
GO:0048514 IEA blood vessel morphogenesis
GO:0060216 IEA definitive hemopoiesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068264 Meis1-001 protein_coding Mus_musculus 0 3843
ENSMUST00000185131 Meis1-201 protein_coding Mus_musculus 0 2470
ENSMUST00000177417 Meis1-008 protein_coding Mus_musculus 0 2470
ENSMUST00000102878 Meis1-004 nonsense_mediated_decay Mus_musculus 0 2451
ENSMUST00000118661 Meis1-006 processed_transcript Mus_musculus 0 2409
ENSMUST00000144988 Meis1-005 protein_coding Mus_musculus 0 2362
ENSDART00000102576 meis1-001 protein_coding Danio_rerio 0 1240
ENSMUST00000177357 Meis1-007 nonsense_mediated_decay Mus_musculus 0 1125
ENSMUST00000137300 Meis1-003 retained_intron Mus_musculus 0 1009
ENSMUST00000125722 Meis1-002 retained_intron Mus_musculus 0 1009
ENSMUST00000110908 Meis2-013 protein_coding Mus_musculus 0 948
ENSMUST00000074285 Meis2-014 protein_coding Mus_musculus 0 926
ENSMUST00000110907 Meis2-001 protein_coding Mus_musculus 0 861
ENSMUST00000110906 Meis2-006 protein_coding Mus_musculus 0 839
ENSMUST00000151279 Meis2-010 processed_transcript Mus_musculus 0 472
ENSDART00000140215 meis1-002 retained_intron Danio_rerio 0 399
ENSMUST00000120995 Meis2-003 processed_transcript Mus_musculus 0 379
ENSMUST00000118654 Meis2-002 retained_intron Mus_musculus 0 228

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