C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myeloid ecotropic viral integration 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000102576 meis1-001 ENSDARG00000012078 7955 - 13:5167187-5246198 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000102576
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000102576 16.775±5.90 26.557±4.96 7.437±3.01 0.189±0.00 3.319±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JR CIL_0007JR_0005 UCNEbase 13:4815743-5449768

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 IMP G1/S transition of mitotic cell cycle
GO:0001525 IMP angiogenesis
GO:0001885 IMP endothelial cell development
GO:0001947 IMP heart looping
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005829 IDA cytosol
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0009880 IMP embryonic pattern specification
GO:0030223 IMP neutrophil differentiation
GO:0030225 IMP macrophage differentiation
GO:0035476 IMP angioblast cell migration
GO:0035907 IMP dorsal aorta development
GO:0043565 IEA sequence-specific DNA binding
GO:0045766 IDA positive regulation of angiogenesis
GO:0048703 IMP embryonic viscerocranium morphogenesis
GO:0048844 IMP artery morphogenesis
GO:0050821 IPI protein stabilization
GO:0060059 IMP embryonic retina morphogenesis in camera-type eye
GO:0060216 IMP definitive hemopoiesis
GO:0060319 IMP primitive erythrocyte differentiation
GO:0060841 IMP venous blood vessel development
GO:0072554 IMP blood vessel lumenization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068264 Meis1-001 protein_coding Mus_musculus 0 1127
ENSMUST00000102878 Meis1-004 nonsense_mediated_decay Mus_musculus 0 889
ENSMUST00000118661 Meis1-006 processed_transcript Mus_musculus 0 710
ENSMUST00000125722 Meis1-002 retained_intron Mus_musculus 0 274
ENSMUST00000137300 Meis1-003 retained_intron Mus_musculus 0 230
ENSMUST00000144988 Meis1-005 protein_coding Mus_musculus 0 841
ENSMUST00000177357 Meis1-007 nonsense_mediated_decay Mus_musculus 0 518
ENSMUST00000177417 Meis1-008 protein_coding Mus_musculus 0 905
ENSMUST00000185131 Meis1-201 protein_coding Mus_musculus 0 907
ENST00000272369 MEIS1-001 protein_coding Homo_sapiens 0 1240
ENST00000398506 MEIS1-003 protein_coding Homo_sapiens 0 963
ENST00000409622 MEIS1-010 processed_transcript Homo_sapiens 0 248
ENST00000437869 MEIS1-006 protein_coding Homo_sapiens 0 259
ENST00000466811 MEIS1-011 processed_transcript Homo_sapiens 0 195
ENST00000488550 MEIS1-002 protein_coding Homo_sapiens 0 981
ENST00000490726 MEIS1-005 processed_transcript Homo_sapiens 0 390
ENST00000491706 MEIS1-008 retained_intron Homo_sapiens 0 246
ENST00000495021 MEIS1-016 protein_coding Homo_sapiens 0 1027
ENST00000496248 MEIS1-009 processed_transcript Homo_sapiens 0 294
ENST00000498705 MEIS1-007 retained_intron Homo_sapiens 0 329
ENST00000560281 MEIS1-019 protein_coding Homo_sapiens 0 902
ENST00000606455 MEIS1-018 processed_transcript Homo_sapiens 0 348

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