| Transcript ID | Adipose | Brain | Lung | Ovary |
|---|---|---|---|---|
| ENST00000345734 | 1.576±0.00 | 0.843±0.00 | 0.704±0.00 | 0.616±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | autophagy related 4A, cysteine peptidase | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000345734  |
ATG4A-002 |
ENSG00000101844 |
9606 | + |
X:108091668-108154671  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006JI | CIL_0006JI_0001 | CGP | X:108084207-108154671 |
| CIL_0006JL | CIL_0006JL_0001 | CGP | X:108091668-108439497 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005737 | ISS | cytoplasm |
| GO:0006508 | IDA | proteolysis |
| GO:0006914 | IEA | autophagy |
| GO:0008234 | IDA | cysteine-type peptidase activity |
| GO:0015031 | IEA | protein transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000112971
|
Atg4a-001 | protein_coding | Mus_musculus | 0 | 869 |
|
ENSMUST00000117271
|
Atg4a-ps-001 | processed_pseudogene | Mus_musculus | 0 | 765 |
|
ENSMUST00000147972
|
Atg4a-003 | retained_intron | Mus_musculus | 0 | 300 |
|
ENSMUST00000118563
|
Syt6-004 | protein_coding | Mus_musculus | 8.00001e-42 | 176 |
