C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006JI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101843-ENSG00000101844 CGP 9606 X:108084207-108154671
GeneTranscriptPositionBiotype
ENSG00000101843 (PSMD10)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 		ENST00000217958 (PSMD10-001) 108084207-108091618 protein_coding
ENST00000338548 (PSMD10-003) 108088480-108091549 retained_intron
ENST00000340200 (PSMD10-006) 108084843-108091520 protein_coding
ENST00000361815 (PSMD10-002) 108084830-108091542 protein_coding
ENST00000372295 (PSMD10-004) 108084775-108091542 protein_coding
ENST00000372296 (PSMD10-005) 108084597-108091542 protein_coding
ENST00000553388 (PSMD10-007) 108087045-108091538 retained_intron
ENSG00000101844 (ATG4A)
autophagy related 4A, cysteine peptidase 		ENST00000343524 (ATG4A-004) 108091810-108154671 nonsense_mediated_decay
ENST00000345734 (ATG4A-002) 108091668-108154671 protein_coding
ENST00000372232 (ATG4A-001) 108091668-108154671 protein_coding
ENST00000372246 (ATG4A-003) 108091784-108154671 nonsense_mediated_decay
ENST00000394892 (ATG4A-005) 108126077-108151858 protein_coding
ENST00000457035 (ATG4A-006) 108091769-108150175 protein_coding
ENST00000474825 (ATG4A-007) 108150032-108153010 processed_transcript
ENST00000489247 (ATG4A-008) 108150068-108153868 processed_transcript
CIL_0006JI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031429-ENSMUSG00000079418 CGP 10090 X:140948429-141164270
GeneTranscriptPositionBiotype
ENSMUSG00000031429 (Psmd10)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 		ENSMUST00000033805 (Psmd10-001) 140948429-140956689 protein_coding
ENSMUST00000112978 (Psmd10-002) 140948429-140956728 protein_coding
ENSMUSG00000079418 (Atg4a)
autophagy related 4A, cysteine peptidase 		ENSMUST00000112971 (Atg4a-001) 140956907-141164270 protein_coding
ENSMUST00000147972 (Atg4a-003) 141162095-141163455 retained_intron
ENSMUST00000153742 (Atg4a-002) 140956950-140992837 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JI_0001ENSG00000101843ENST00000217958ENST00000338548ENST00000340200ENST00000361815ENST00000372295ENST00000372296ENST00000553388ENSG00000101844ENST00000343524ENST00000345734ENST00000372232ENST00000372246ENST00000394892ENST00000457035ENST00000474825ENST00000489247CIL_0006JI_0002ENSMUSG00000031429ENSMUST00000033805ENSMUST00000112978ENSMUSG00000079418ENSMUST00000112971ENSMUST00000147972ENSMUST00000153742
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JI_0001ENSG00000101843ENST00000217958ENST00000338548ENST00000340200ENST00000361815ENST00000372295ENST00000372296ENSG00000101844ENST00000343524ENST00000345734ENST00000372232ENST00000372246ENST00000394892CIL_0006JI_0002ENSMUSG00000031429ENSMUST00000033805ENSMUST00000112978ENSMUSG00000079418ENSMUST00000112971ENSMUST00000147972
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101843 ENST00000217958 4.943±0.00 7.194±0.00 1.207±0.00 13.280±3.51 6.516±1.41 6.982±2.86 1.873±0.55 5.265±2.47 3.864±1.88 6.882±4.38 1.822±0.06 11.710±4.89 11.647±3.35 10.590±7.25
ENST00000338548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.632±0.00 6.845±0.00 3.773±0.00
ENST00000340200 5.619±0.00 4.836±0.00 3.994±0.00 6.123±0.00 5.925±0.13 4.464±0.00 0.672±0.00 0.931±0.00 3.527±0.00 6.580±0.00 2.069±1.02 2.564±0.00 N/A 6.528±0.00
ENST00000361815 N/A N/A 2.089±0.00 7.889±1.76 N/A 1.627±0.00 0.614±0.00 N/A N/A N/A N/A 5.192±0.00 N/A N/A
ENST00000372295 N/A N/A N/A N/A N/A N/A 1.180±0.23 N/A N/A 4.167±2.45 N/A N/A N/A N/A
ENST00000372296 3.269±0.00 6.346±0.00 N/A 8.299±0.00 5.281±0.00 9.446±0.00 1.457±0.00 6.698±0.00 3.514±0.00 6.327±0.00 1.006±0.00 1.641±0.00 1.681±0.00 4.812±0.00
ENST00000553388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000101844 ENST00000343524 N/A 1.532±0.00 N/A N/A N/A 0.664±0.00 1.233±0.00 N/A N/A 1.495±0.00 0.626±0.00 N/A 0.465±0.00 1.493±0.00
ENST00000345734 1.576±0.00 N/A N/A 0.843±0.00 N/A N/A N/A N/A N/A 0.704±0.00 N/A 0.616±0.00 N/A N/A
ENST00000372232 1.076±0.00 N/A N/A 0.334±0.00 2.739±0.84 1.680±0.69 1.724±1.00 3.670±2.96 4.440±0.00 3.159±0.00 1.355±0.00 1.485±0.82 2.341±0.38 0.732±0.07
ENST00000372246 0.576±0.00 0.606±0.00 N/A 0.417±0.20 N/A 0.262±0.00 0.595±0.04 N/A 1.068±0.00 0.850±0.53 0.508±0.20 0.414±0.00 0.624±0.14 2.175±0.05
ENST00000394892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.825±0.00 N/A 2.169±0.00 N/A
ENST00000457035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031429 ENSMUST00000033805 3.390±0.50 1.784±0.37 6.341±0.46 3.789±1.77 3.067±1.00 3.864±0.43 2.885±0.44 5.348±1.03 7.555±5.19 3.075±0.44 3.496±0.61 3.825±2.87 7.777±3.43 4.192±1.60
ENSMUST00000112978 1.081±0.37 0.509±0.00 2.249±0.13 2.429±0.35 1.004±0.54 0.682±0.10 0.792±0.00 1.220±0.50 1.736±1.26 1.334±0.55 0.657±0.18 1.647±0.80 3.055±1.22 1.345±0.44
ENSMUSG00000079418 ENSMUST00000112971 1.526±0.59 0.800±0.24 5.220±1.03 1.053±0.42 1.139±0.39 1.339±0.54 1.905±0.66 2.634±0.67 4.656±3.49 1.269±0.26 11.163±0.57 1.549±1.85 8.135±3.59 1.061±0.53
ENSMUST00000147972 1.554±0.54 0.672±0.29 N/A 2.687±0.00 0.763±0.02 0.625±0.28 N/A N/A 0.740±0.00 1.924±0.63 N/A 1.093±0.18 2.313±0.00 0.918±0.00
ENSMUST00000153742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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