C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tRNA methyltransferase 10 homolog B (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377753 TRMT10B-201 ENSG00000165275 9606 + 9:37753803-37778965 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverMuscleOvaryTestisENST00000377753
Transcript ID Adrenal Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000377753 1.310±0.00 0.775±0.14 1.479±0.00 0.468±0.11 0.936±0.00 1.201±0.75 0.344±0.00 1.218±0.06 1.000±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TI CIL_0006TI_0001 CGP 9:37651000-37778972
CIL_00081A CIL_00081A_0001 VISTA 9:37738698-38340102
CIL_0006TH CIL_0006TH_0001 CGP 9:37753803-37801437

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126972 Trmt10b-003 processed_transcript Mus_musculus 0 431
ENSMUST00000107800 Trmt10b-002 protein_coding Mus_musculus 0 431
ENSMUST00000044673 Trmt10b-001 protein_coding Mus_musculus 0 431
ENSMUST00000141659 Trmt10b-005 processed_transcript Mus_musculus 0 241

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