C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 34
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000391992 HNRNPA1P34-001 ENSG00000213049 9606 - 12:9027532-9029089 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainKidneyLiverLungMuscleOvaryTestisENST00000391992
Transcript ID Adipose Adrenal Brain Kidney Liver Lung Muscle Ovary Testis
ENST00000391992 0.027±0.00 0.084±0.00 0.042±0.00 0.014±0.00 0.076±0.00 0.023±0.00 0.012±0.00 0.088±0.03 0.038±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HL CIL_0008HL_0001 VISTA 12:8543390-9149656

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 1077
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 1077
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 1026
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 1011
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 1002
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 981
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 826
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 815
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 588
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 399

Loading