C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4A1 pseudogene 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394444 EIF4A1P8-001 ENSG00000213484 9606 + 10:92136875-92138370 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungOvaryENST00000394444
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary
ENST00000394444 0.044±0.00 0.047±0.00 0.153±0.07 0.022±0.00 0.072±0.06 0.429±0.35 0.043±0.00 0.070±0.00 0.080±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018R CIL_00018R_0001 CGP 10:91923769-92291087
CIL_00018Q CIL_00018Q_0001 CGP 10:92046692-92353964

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163666 Eif4a1-001 protein_coding Mus_musculus 0 1208
ENSMUST00000122226 Eif4a-ps4-001 processed_pseudogene Mus_musculus 0 1203
ENSMUST00000072982 Gm5513-201 processed_pseudogene Mus_musculus 0 1151
ENSMUST00000128519 Eif4a1-012 retained_intron Mus_musculus 0 835
ENSMUST00000102589 Eif4a1-013 nonsense_mediated_decay Mus_musculus 0 741
ENSMUST00000121086 Gm11258-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000123995 Eif4a1-002 retained_intron Mus_musculus 0 361

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