C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11258
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121086 Gm11258-001 ENSMUSG00000083659 10090 - 4:74688107-74689324 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000121086
Transcript ID Testis
ENSMUST00000121086 0.038±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001D7 CIL_0001D7_0002 CGP 4:74242497-75278305

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293831 EIF4A1-001 protein_coding Homo_sapiens 0 819
ENST00000394444 EIF4A1P8-001 processed_pseudogene Homo_sapiens 0 658
ENST00000396527 EIF4A1-003 retained_intron Homo_sapiens 1.00053e-42 178
ENST00000411521 EIF4A1P3-001 processed_pseudogene Homo_sapiens 0 191
ENST00000415667 EIF4A1P13-001 processed_pseudogene Homo_sapiens 2e-38 161
ENST00000421800 EIF4A1P7-001 processed_pseudogene Homo_sapiens 0 636
ENST00000422633 EIF4A1P2-001 processed_pseudogene Homo_sapiens 0 797
ENST00000428062 EIF4A1P5-001 processed_pseudogene Homo_sapiens 0 669
ENST00000448133 EIF4A1P6-001 processed_pseudogene Homo_sapiens 0 643
ENST00000451239 EIF4A1P11-001 processed_pseudogene Homo_sapiens 0 207
ENST00000550578 RP11-1136G11.6-001 processed_pseudogene Homo_sapiens 0 702
ENST00000551910 EIF4A1P12-001 processed_pseudogene Homo_sapiens 6e-37 156
ENST00000576035 EIF4A1P9-001 processed_pseudogene Homo_sapiens 0 667
ENST00000577269 EIF4A1-007 protein_coding Homo_sapiens 0 819
ENST00000577738 EIF4A1-016 retained_intron Homo_sapiens 0 296
ENST00000577929 EIF4A1-018 protein_coding Homo_sapiens 0 261
ENST00000578324 EIF4A1-009 retained_intron Homo_sapiens 0 819
ENST00000578476 EIF4A1-014 nonsense_mediated_decay Homo_sapiens 0 353
ENST00000578495 EIF4A1-026 protein_coding Homo_sapiens 0 756
ENST00000578754 EIF4A1-023 protein_coding Homo_sapiens 5.00264e-43 178
ENST00000579139 EIF4A1-013 nonsense_mediated_decay Homo_sapiens 0 305
ENST00000580461 EIF4A1-002 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000580888 EIF4A1-038 nonsense_mediated_decay Homo_sapiens 0 560
ENST00000581384 EIF4A1-037 protein_coding Homo_sapiens 0 608
ENST00000581544 EIF4A1-004 nonsense_mediated_decay Homo_sapiens 0 241
ENST00000581770 EIF4A1-015 protein_coding Homo_sapiens 0 189
ENST00000582050 EIF4A1-032 nonsense_mediated_decay Homo_sapiens 0 259
ENST00000582169 EIF4A1-024 protein_coding Homo_sapiens 0 460
ENST00000582213 EIF4A1-021 retained_intron Homo_sapiens 0 285
ENST00000582746 EIF4A1-008 protein_coding Homo_sapiens 0 819
ENST00000582848 EIF4A1-027 retained_intron Homo_sapiens 0 448
ENST00000583389 EIF4A1-031 protein_coding Homo_sapiens 0 189
ENST00000583802 EIF4A1-022 protein_coding Homo_sapiens 0 575
ENST00000584712 EIF4A1-036 retained_intron Homo_sapiens 0 296
ENST00000584784 EIF4A1-028 protein_coding Homo_sapiens 0 619
ENST00000584798 EIF4A1-010 retained_intron Homo_sapiens 1.00053e-42 178
ENST00000584860 EIF4A1-017 protein_coding Homo_sapiens 0 774
ENST00000584901 EIF4A1-006 retained_intron Homo_sapiens 0 475
ENST00000585024 EIF4A1-025 protein_coding Homo_sapiens 0 549
ENST00000603184 RP11-175E9.2-001 processed_pseudogene Homo_sapiens 0 217
ENST00000614237 SENP3-EIF4A1-001 nonsense_mediated_decay Homo_sapiens 0 819

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