C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L13 pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396818 RPL13P-001 ENSG00000213916 9606 + 6:28861416-28862047 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyMuscleOvaryENST00000396818
Transcript ID Adipose Adrenal Breast Colon Kidney Muscle Ovary
ENST00000396818 0.156±0.00 0.298±0.00 0.188±0.00 0.042±0.00 0.046±0.00 0.037±0.00 0.113±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120234 Gm12918-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000000756 Rpl13-001 protein_coding Mus_musculus 0 448
ENSMUST00000121821 Gm15710-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000079761 Gm10071-201 processed_pseudogene Mus_musculus 0 442
ENSMUST00000132275 Rpl13-004 retained_intron Mus_musculus 0 427
ENSMUST00000104990 Gm7290-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000079960 Rpl13-ps3-201 protein_coding Mus_musculus 0 353
ENSMUST00000117813 Rpl13-ps5-001 processed_pseudogene Mus_musculus 0 307
ENSMUST00000119124 Gm15131-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000121199 Gm12466-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000129311 Rpl13-002 retained_intron Mus_musculus 0 250
ENSMUST00000119734 Gm12011-001 processed_pseudogene Mus_musculus 8.00001e-42 174

Loading