C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12466
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121199 Gm12466-001 ENSMUSG00000083539 10090 + 4:52240903-52241522 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryPlacentaENSMUST00000121199
Transcript ID Liver Ovary Placenta
ENSMUST00000121199 0.019±0.00 0.191±0.08 0.090±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QK CIL_0001QK_0002 CGP 4:51216678-52488260

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311528 RPL13-001 protein_coding Homo_sapiens 0 425
ENST00000392730 RPL13P12-001 processed_pseudogene Homo_sapiens 0 420
ENST00000393099 RPL13-002 protein_coding Homo_sapiens 0 425
ENST00000396818 RPL13P-001 processed_pseudogene Homo_sapiens 0 268
ENST00000399461 RPL13-003 retained_intron Homo_sapiens 0 353
ENST00000412023 RPL13P5-002 processed_transcript Homo_sapiens 0 193
ENST00000413822 RPL13P-001 processed_pseudogene Homo_sapiens 0 263
ENST00000421824 RPL13P5-004 processed_transcript Homo_sapiens 3e-22 110
ENST00000427418 RPL13P-001 processed_pseudogene Homo_sapiens 0 263
ENST00000431236 RPL13P-001 processed_pseudogene Homo_sapiens 0 263
ENST00000440069 RPL13P-001 processed_pseudogene Homo_sapiens 0 268
ENST00000440687 RPL13P2-001 processed_pseudogene Homo_sapiens 0 268
ENST00000441655 RPL13P5-001 transcribed_processed_pseudogene Homo_sapiens 0 193
ENST00000451612 RPL13P5-003 processed_transcript Homo_sapiens 0.0000002 60
ENST00000452368 RPL13-015 protein_coding Homo_sapiens 1.00053e-42 178
ENST00000473114 RP11-333A23.2-001 processed_pseudogene Homo_sapiens 0 189
ENST00000474329 CTD-2086L14.1-001 processed_pseudogene Homo_sapiens 0 189
ENST00000484610 RPL13-004 retained_intron Homo_sapiens 0 296
ENST00000491523 RPL13-005 retained_intron Homo_sapiens 0 274
ENST00000562879 RPL13-011 nonsense_mediated_decay Homo_sapiens 0 294
ENST00000563270 RPL13-016 protein_coding Homo_sapiens 0 346
ENST00000567815 RPL13-009 protein_coding Homo_sapiens 0 425
ENST00000593989 RPL13P-001 processed_pseudogene Homo_sapiens 0 268
ENST00000608758 RPL13P-001 processed_pseudogene Homo_sapiens 0 268
ENST00000609856 RPL13P-001 processed_pseudogene Homo_sapiens 0 268

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