C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10071
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079761 Gm10071-201 ENSMUSG00000059776 10090 + 3:58987170-58987805 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079761
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079761 0.642±0.63 0.239±0.18 0.421±0.12 5.920±5.89 0.334±0.24 0.450±0.22 0.120±0.03 0.181±0.09 3.418±10.27 0.218±0.10 0.122±0.00 0.560±0.31 0.307±0.20 0.115±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ID CIL_0002ID_0002 CGP 3:58844028-59318410

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311528 RPL13-001 protein_coding Homo_sapiens 0 699
ENST00000392730 RPL13P12-001 processed_pseudogene Homo_sapiens 0 688
ENST00000393099 RPL13-002 protein_coding Homo_sapiens 0 699
ENST00000396818 RPL13P-001 processed_pseudogene Homo_sapiens 0 442
ENST00000399461 RPL13-003 retained_intron Homo_sapiens 0 568
ENST00000412023 RPL13P5-002 processed_transcript Homo_sapiens 0 305
ENST00000413822 RPL13P-001 processed_pseudogene Homo_sapiens 0 436
ENST00000421824 RPL13P5-004 processed_transcript Homo_sapiens 4e-31 139
ENST00000427418 RPL13P-001 processed_pseudogene Homo_sapiens 0 436
ENST00000431236 RPL13P-001 processed_pseudogene Homo_sapiens 0 436
ENST00000440069 RPL13P-001 processed_pseudogene Homo_sapiens 0 442
ENST00000440687 RPL13P2-001 processed_pseudogene Homo_sapiens 0 385
ENST00000441655 RPL13P5-001 transcribed_processed_pseudogene Homo_sapiens 0 303
ENST00000451612 RPL13P5-003 processed_transcript Homo_sapiens 0.00000000003 73
ENST00000452368 RPL13-015 protein_coding Homo_sapiens 0 292
ENST00000467736 RPL13-006 protein_coding Homo_sapiens 0 448
ENST00000473114 RP11-333A23.2-001 processed_pseudogene Homo_sapiens 0 298
ENST00000474329 CTD-2086L14.1-001 processed_pseudogene Homo_sapiens 0 435
ENST00000484610 RPL13-004 retained_intron Homo_sapiens 0 435
ENST00000491523 RPL13-005 retained_intron Homo_sapiens 0 438
ENST00000562879 RPL13-011 nonsense_mediated_decay Homo_sapiens 0 414
ENST00000563270 RPL13-016 protein_coding Homo_sapiens 0 547
ENST00000565571 RPL13-018 retained_intron Homo_sapiens 0 501
ENST00000567815 RPL13-009 protein_coding Homo_sapiens 0 699
ENST00000593989 RPL13P-001 processed_pseudogene Homo_sapiens 0 442
ENST00000608758 RPL13P-001 processed_pseudogene Homo_sapiens 0 442
ENST00000609856 RPL13P-001 processed_pseudogene Homo_sapiens 0 442

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