C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5254
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188353 RP24-77I21.1-001 ENSMUSG00000101129 10090 - 1:57291425-57292401 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000188353
Transcript ID Ovary Placenta Testis
ENSMUST00000188353 0.152±0.12 0.012±0.00 0.037±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000227157 LDHA-003 protein_coding Homo_sapiens 0 649
ENST00000375710 LDHA-023 retained_intron Homo_sapiens 0 555
ENST00000379412 LDHA-005 protein_coding Homo_sapiens 0 837
ENST00000394996 LDHAP5-001 processed_pseudogene Homo_sapiens 0 422
ENST00000396222 LDHA-002 protein_coding Homo_sapiens 0 627
ENST00000397561 LDHAP4-001 processed_pseudogene Homo_sapiens 0 741
ENST00000398295 LDHAP7-001 processed_pseudogene Homo_sapiens 1e-21 108
ENST00000422447 LDHA-001 protein_coding Homo_sapiens 0 837
ENST00000430553 LDHA-010 protein_coding Homo_sapiens 0 422
ENST00000460405 LDHA-008 retained_intron Homo_sapiens 0 486
ENST00000469976 LDHA-006 retained_intron Homo_sapiens 2e-32 143
ENST00000478970 LDHA-009 protein_coding Homo_sapiens 0 420
ENST00000486690 LDHA-017 nonsense_mediated_decay Homo_sapiens 0 403
ENST00000494573 LDHA-007 retained_intron Homo_sapiens 0 287
ENST00000495052 LDHA-004 protein_coding Homo_sapiens 0 366
ENST00000509421 LDHAP1-001 processed_pseudogene Homo_sapiens 0 651
ENST00000535451 LDHA-014 protein_coding Homo_sapiens 0 259
ENST00000536528 LDHA-021 nonsense_mediated_decay Homo_sapiens 0 233
ENST00000537296 LDHA-022 retained_intron Homo_sapiens 0 619
ENST00000538451 LDHA-024 retained_intron Homo_sapiens 0 422
ENST00000539814 LDHA-016 nonsense_mediated_decay Homo_sapiens 0 287
ENST00000540430 LDHA-201 protein_coding Homo_sapiens 0 837
ENST00000541097 LDHA-019 nonsense_mediated_decay Homo_sapiens 0 292
ENST00000542179 LDHA-020 protein_coding Homo_sapiens 0 837
ENST00000543445 LDHA-013 protein_coding Homo_sapiens 0 486
ENST00000543695 LDHA-015 nonsense_mediated_decay Homo_sapiens 0 281
ENST00000545215 LDHA-011 nonsense_mediated_decay Homo_sapiens 0 556
ENST00000545467 LDHA-018 nonsense_mediated_decay Homo_sapiens 7e-32 141

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