C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398372 SMARCE1P6-001 ENSG00000214465 9606 + 2:26149204-26150731 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000398372
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000398372 0.094±0.00 0.396±0.00 0.058±0.00 0.158±0.00 0.048±0.00 0.071±0.00 0.157±0.00 0.012±0.00 0.038±0.00 0.040±0.01 0.013±0.00 0.123±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103133 Smarce1-001 protein_coding Mus_musculus 0 1267
ENSMUST00000180067 Gm1815-201 processed_pseudogene Mus_musculus 0 1007
ENSMUST00000178171 Gm8494-201 processed_pseudogene Mus_musculus 0 802
ENSMUST00000155062 Smarce1-005 processed_transcript Mus_musculus 0 459
ENSMUST00000135040 Smarce1-003 processed_transcript Mus_musculus 0 287
ENSMUST00000156160 Smarce1-006 processed_transcript Mus_musculus 0 287
ENSMUST00000128707 Smarce1-004 processed_transcript Mus_musculus 7.00649e-45 185

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