C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399253 RP3-507I15.1-001 ENSG00000214925 9606 + X:141138478-141139174 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryTestisENST00000399253
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000399253 0.181±0.00 0.335±0.00 0.101±0.00 0.244±0.00 0.136±0.00 0.099±0.00 0.045±0.00 0.147±0.00 0.396±0.00 0.487±0.00 0.086±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172023 Rpl36a-003 retained_intron Mus_musculus 0 302
ENSMUST00000113211 Rpl36a-001 protein_coding Mus_musculus 0 302
ENSMUST00000149857 Rpl36a-005 retained_intron Mus_musculus 0 294
ENSMUST00000170828 Rpl36a-004 nonsense_mediated_decay Mus_musculus 0 294
ENSMUST00000116105 Gm11970-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000081987 Rpl36a-ps1-201 processed_pseudogene Mus_musculus 0 291
ENSMUST00000174479 Dtnb-005 protein_coding Mus_musculus 0 274
ENSMUST00000054544 Rpl36al-001 protein_coding Mus_musculus 0 252
ENSMUST00000110619 Rpl36al-002 protein_coding Mus_musculus 0 252
ENSMUST00000110620 Rpl36al-003 protein_coding Mus_musculus 0 252
ENSMUST00000120093 Rpl36a-ps3-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000142299 Gm13194-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000121439 Gm12936-001 processed_pseudogene Mus_musculus 0 211
ENSMUST00000118509 Gm13755-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000152266 Rpl36a-002 retained_intron Mus_musculus 0 198
ENSMUST00000169457 Rpl36a-006 retained_intron Mus_musculus 1e-22 110

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