C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404780 RP3-403A15.1-001 ENSG00000220694 9606 + 6:127435636-127436189 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartLungTestisENST00000404780
Transcript ID Adipose Brain Heart Lung Testis
ENST00000404780 0.045±0.00 0.118±0.00 0.042±0.00 0.020±0.00 0.041±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121001 Rpl17-ps5-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000118924 Rpl17-ps8-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000079716 Rpl17-201 protein_coding Mus_musculus 0 407
ENSMUST00000119383 Rpl17-ps10-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000119541 Rpl17-ps9-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000120241 Rpl17-ps4-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000162765 Gm9719-001 processed_pseudogene Mus_musculus 0 390
ENSMUST00000117614 Gm11531-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000119731 Gm4986-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000120579 Gm11343-001 processed_pseudogene Mus_musculus 0 322
ENSMUST00000164501 Gm17214-001 processed_pseudogene Mus_musculus 0 296
ENSMUST00000185744 RP23-304F24.3-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000164923 Gm5277-201 protein_coding Mus_musculus 0 219

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