C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5277
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164923 Gm5277-201 ENSMUSG00000091361 10090 - 3:78891864-78892451 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartOvaryTestisENSMUST00000164923
Transcript ID Heart Ovary Testis
ENSMUST00000164923 0.093±0.00 0.152±0.00 0.107±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332968 RPL17-C18orf32-003 protein_coding Homo_sapiens 0 361
ENST00000391360 RP11-347C18.1-001 processed_pseudogene Homo_sapiens 0 368
ENST00000394133 RP11-624L12.1-001 processed_pseudogene Homo_sapiens 0 392
ENST00000396131 RPL17P50-001 processed_pseudogene Homo_sapiens 0 344
ENST00000404330 RPL17P25-001 processed_pseudogene Homo_sapiens 0 381
ENST00000404382 RP3-472M2.2-001 processed_pseudogene Homo_sapiens 1e-34 150
ENST00000404780 RP3-403A15.1-001 processed_pseudogene Homo_sapiens 0 219
ENST00000407033 RPL17P26-001 processed_pseudogene Homo_sapiens 0 394
ENST00000414070 RP11-20O24.4-001 processed_pseudogene Homo_sapiens 0 472
ENST00000416091 AC007272.3-001 processed_pseudogene Homo_sapiens 0 228
ENST00000417593 RPL17P11-001 processed_pseudogene Homo_sapiens 5.00264e-43 178
ENST00000418495 RPL17-201 protein_coding Homo_sapiens 0 477
ENST00000419491 RPL17P17-001 processed_pseudogene Homo_sapiens 0 322
ENST00000420302 RP11-215A21.2-001 processed_pseudogene Homo_sapiens 0 446
ENST00000422360 RPL17P43-001 processed_pseudogene Homo_sapiens 0 287
ENST00000429934 RP11-383F6.1-001 processed_pseudogene Homo_sapiens 0 235
ENST00000443728 RPL17P49-001 processed_pseudogene Homo_sapiens 1e-37 159
ENST00000444020 RP11-1029M24.1-001 processed_pseudogene Homo_sapiens 0 387
ENST00000445304 RPL17P1-001 processed_pseudogene Homo_sapiens 0 303
ENST00000445757 AC007677.2-001 processed_pseudogene Homo_sapiens 0 215
ENST00000446498 RP3-476K8.4-001 processed_pseudogene Homo_sapiens 0 398
ENST00000447415 RP4-612B15.2-001 processed_pseudogene Homo_sapiens 0 418
ENST00000448403 RP11-383G10.3-001 processed_pseudogene Homo_sapiens 0 366
ENST00000452862 AC144530.1-001 processed_pseudogene Homo_sapiens 0 433
ENST00000461464 RPL17P20-001 processed_pseudogene Homo_sapiens 0 353
ENST00000467688 RPL17P22-001 processed_pseudogene Homo_sapiens 0 420
ENST00000469329 RPL17P41-001 processed_pseudogene Homo_sapiens 0 322
ENST00000471722 RP4-706A16.3-001 processed_pseudogene Homo_sapiens 0 466
ENST00000475372 RPL17P44-001 processed_pseudogene Homo_sapiens 0 342
ENST00000483964 RP11-7F18.1-001 processed_pseudogene Homo_sapiens 0 346
ENST00000485656 RP11-273P3.1-001 processed_pseudogene Homo_sapiens 1e-39 167
ENST00000490729 RPL17P37-001 processed_pseudogene Homo_sapiens 0 211
ENST00000496512 RPL17P46-001 processed_pseudogene Homo_sapiens 0 268
ENST00000498103 RP11-592N21.1-001 processed_pseudogene Homo_sapiens 0 455
ENST00000498256 RPL17P33-001 processed_pseudogene Homo_sapiens 0 435
ENST00000511559 RP11-115A14.1-001 processed_pseudogene Homo_sapiens 0 196
ENST00000524791 RP11-757C15.4-001 processed_pseudogene Homo_sapiens 2e-38 163
ENST00000560214 RP11-14C10.2-001 processed_pseudogene Homo_sapiens 9.99995e-41 171
ENST00000577910 RPL17-C18orf32-002 nonsense_mediated_decay Homo_sapiens 0 477
ENST00000578532 RPL17-017 protein_coding Homo_sapiens 0 451
ENST00000579248 RPL17-018 protein_coding Homo_sapiens 0 477
ENST00000579408 RPL17-003 protein_coding Homo_sapiens 0 477
ENST00000579820 C18orf32-201 protein_coding Homo_sapiens 0 361
ENST00000580210 RPL17-015 protein_coding Homo_sapiens 0 436
ENST00000580261 RPL17-001 protein_coding Homo_sapiens 0 477
ENST00000580387 RPL17-019 protein_coding Homo_sapiens 0 333
ENST00000581091 RPL17-012 processed_transcript Homo_sapiens 0 366
ENST00000581373 RPL17-002 protein_coding Homo_sapiens 0 387
ENST00000581741 RPL17-009 retained_intron Homo_sapiens 0 300
ENST00000583036 RPL17-008 protein_coding Homo_sapiens 0 368
ENST00000583637 RPL17-016 protein_coding Homo_sapiens 0 451
ENST00000584364 RPL17-014 retained_intron Homo_sapiens 0 390
ENST00000584895 RPL17-C18orf32-001 protein_coding Homo_sapiens 0 451
ENST00000596405 CTD-2550O8.7-001 processed_pseudogene Homo_sapiens 0 296
ENST00000605218 RPL17P51-001 processed_pseudogene Homo_sapiens 6e-19 97
ENST00000615760 RPL17-024 protein_coding Homo_sapiens 0 344
ENST00000617346 RPL17-022 protein_coding Homo_sapiens 0 451
ENST00000618613 RPL17-202 protein_coding Homo_sapiens 0 477
ENST00000618619 RPL17-023 protein_coding Homo_sapiens 0 477

Loading