C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9719
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162765 Gm9719-001 ENSMUSG00000090001 10090 - 9:75098598-75099140 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonLiverLungOvaryPlacentaTestisENSMUST00000162765
Transcript ID Adipose Adrenal Bladder Breast Colon Liver Lung Ovary Placenta Testis
ENSMUST00000162765 0.128±0.02 0.269±0.00 0.052±0.03 0.234±0.13 0.344±0.14 0.016±0.00 0.133±0.00 0.504±0.00 0.068±0.01 0.214±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YK CIL_0004YK_0002 CGP 9:75037614-75223688

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000391360 RP11-347C18.1-001 processed_pseudogene Homo_sapiens 0 507
ENST00000394133 RP11-624L12.1-001 processed_pseudogene Homo_sapiens 0 532
ENST00000396131 RPL17P50-001 processed_pseudogene Homo_sapiens 0 479
ENST00000404330 RPL17P25-001 processed_pseudogene Homo_sapiens 0 516
ENST00000404382 RP3-472M2.2-001 processed_pseudogene Homo_sapiens 0 287
ENST00000404780 RP3-403A15.1-001 processed_pseudogene Homo_sapiens 0 390
ENST00000407033 RPL17P26-001 processed_pseudogene Homo_sapiens 0 527
ENST00000414070 RP11-20O24.4-001 processed_pseudogene Homo_sapiens 0 610
ENST00000416091 AC007272.3-001 processed_pseudogene Homo_sapiens 0 353
ENST00000417593 RPL17P11-001 processed_pseudogene Homo_sapiens 0 320
ENST00000418495 RPL17-201 protein_coding Homo_sapiens 0 621
ENST00000419491 RPL17P17-001 processed_pseudogene Homo_sapiens 0 401
ENST00000420302 RP11-215A21.2-001 processed_pseudogene Homo_sapiens 0 599
ENST00000422360 RPL17P43-001 processed_pseudogene Homo_sapiens 0 392
ENST00000442115 RP11-11M20.2-001 processed_pseudogene Homo_sapiens 0 233
ENST00000443728 RPL17P49-001 processed_pseudogene Homo_sapiens 5e-37 158
ENST00000444020 RP11-1029M24.1-001 processed_pseudogene Homo_sapiens 0 545
ENST00000445757 AC007677.2-001 processed_pseudogene Homo_sapiens 0 307
ENST00000446498 RP3-476K8.4-001 processed_pseudogene Homo_sapiens 0 544
ENST00000447415 RP4-612B15.2-001 processed_pseudogene Homo_sapiens 0 556
ENST00000448403 RP11-383G10.3-001 processed_pseudogene Homo_sapiens 0 527
ENST00000452862 AC144530.1-001 processed_pseudogene Homo_sapiens 0 566
ENST00000456309 RP11-317B3.2-001 processed_pseudogene Homo_sapiens 0 364
ENST00000461464 RPL17P20-001 processed_pseudogene Homo_sapiens 0 494
ENST00000467688 RPL17P22-001 processed_pseudogene Homo_sapiens 0 564
ENST00000469329 RPL17P41-001 processed_pseudogene Homo_sapiens 0 483
ENST00000471722 RP4-706A16.3-001 processed_pseudogene Homo_sapiens 0 627
ENST00000475372 RPL17P44-001 processed_pseudogene Homo_sapiens 0 472
ENST00000483964 RP11-7F18.1-001 processed_pseudogene Homo_sapiens 0 468
ENST00000488371 RP11-864J10.2-001 processed_pseudogene Homo_sapiens 0 403
ENST00000488887 AF131215.1-001 processed_pseudogene Homo_sapiens 0 333
ENST00000490729 RPL17P37-001 processed_pseudogene Homo_sapiens 0 399
ENST00000494237 RP11-45P15.2-001 processed_pseudogene Homo_sapiens 0 399
ENST00000498103 RP11-592N21.1-001 processed_pseudogene Homo_sapiens 0 599
ENST00000498256 RPL17P33-001 processed_pseudogene Homo_sapiens 0 560
ENST00000504072 CTD-2218G20.1-001 processed_pseudogene Homo_sapiens 0 193
ENST00000524791 RP11-757C15.4-001 processed_pseudogene Homo_sapiens 0 285
ENST00000577910 RPL17-C18orf32-002 nonsense_mediated_decay Homo_sapiens 0 621
ENST00000579248 RPL17-018 protein_coding Homo_sapiens 0 621
ENST00000579408 RPL17-003 protein_coding Homo_sapiens 0 621
ENST00000580210 RPL17-015 protein_coding Homo_sapiens 0 582
ENST00000580261 RPL17-001 protein_coding Homo_sapiens 0 621
ENST00000581373 RPL17-002 protein_coding Homo_sapiens 0 527
ENST00000584364 RPL17-014 retained_intron Homo_sapiens 0 531
ENST00000596405 CTD-2550O8.7-001 processed_pseudogene Homo_sapiens 0 412
ENST00000605218 RPL17P51-001 processed_pseudogene Homo_sapiens 2e-38 161
ENST00000618613 RPL17-202 protein_coding Homo_sapiens 0 621
ENST00000618619 RPL17-023 protein_coding Homo_sapiens 0 621

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