C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: fascin actin-bundling protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405801 FSCN1-005 ENSG00000075618 9606 + 7:5594686-5603998 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000405801
Transcript ID Bladder
ENST00000405801 1.138±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000854 CIL_000854_0001 VISTA 7:5332287-5936913
CIL_0002V8 CIL_0002V8_0001 CGP 7:5527151-5606655
CIL_00027J CIL_00027J_0002 CGP 7:5592823-5781739

Gene Ontology

GO IDEvidence TypeGO Description
GO:0030674 IEA protein binding, bridging
GO:0051015 IEA actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000139131 Fscn1-004 protein_coding Mus_musculus 0 529
ENSMUST00000137552 Fscn1-005 protein_coding Mus_musculus 0 527
ENSMUST00000129306 Fscn1-002 protein_coding Mus_musculus 0 527
ENSMUST00000031565 Fscn1-001 protein_coding Mus_musculus 0 527
ENSMUST00000150622 Fscn1-003 protein_coding Mus_musculus 0 409
ENSMUST00000135293 Fscn1-006 retained_intron Mus_musculus 0 329

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