C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chimerin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409089 CHN1-012 ENSG00000128656 9606 - 2:174801707-174847381 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HC CIL_0001HC_0001 CGP 2:174747592-175005369
CIL_0001HB CIL_0001HB_0001 CGP 2:174799363-175168382

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180045 Chn1-202 protein_coding Mus_musculus 0 658
ENSMUST00000102677 Chn1-002 protein_coding Mus_musculus 0 658
ENSMUST00000112024 Chn1-001 protein_coding Mus_musculus 0 658
ENSMUST00000070579 Chn1-003 protein_coding Mus_musculus 0 656
ENSMUST00000166199 Chn1-201 protein_coding Mus_musculus 0 427
ENSMUST00000124450 Chn1-006 nonsense_mediated_decay Mus_musculus 0 351
ENSMUST00000154258 Chn1-007 protein_coding Mus_musculus 0 348
ENSMUST00000136953 Chn1-008 protein_coding Mus_musculus 0 285
ENSMUST00000139252 Chn1-004 nonsense_mediated_decay Mus_musculus 0 265

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