C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: high mobility group box 3 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000411913 HMGB3P2-001 ENSG00000231470 9606 - 20:36076018-36076601 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000411913
Transcript ID Ovary Testis
ENST00000411913 0.050±0.00 0.126±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056R CIL_00056R_0001 CGP 20:35954564-36232799

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078030 Gm6104-201 protein_coding Mus_musculus 0 599
ENSMUST00000088874 Hmgb3-004 protein_coding Mus_musculus 0 599
ENSMUST00000114582 Hmgb3-003 protein_coding Mus_musculus 0 599
ENSMUST00000015361 Hmgb3-002 protein_coding Mus_musculus 0 599
ENSMUST00000072699 Hmgb3-001 protein_coding Mus_musculus 0 599
ENSMUST00000132145 Hmgb3-006 retained_intron Mus_musculus 0 593
ENSMUST00000121238 Gm11805-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000120072 Gm5060-001 processed_pseudogene Mus_musculus 0 520
ENSMUST00000123100 Hmgb3-005 protein_coding Mus_musculus 0 481
ENSMUST00000155930 Gm8813-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000117806 Gm15576-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000117771 Gm5752-001 processed_pseudogene Mus_musculus 0 375

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