C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413437 CSTF2-004 ENSG00000101811 9606 + X:100820536-100824257 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLungOvaryPlacentaTestisENST00000413437
Transcript ID Brain Breast Lung Ovary Placenta Testis
ENST00000413437 1.607±0.00 1.724±0.00 2.052±0.00 4.525±0.00 2.897±0.00 5.375±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BC CIL_0007BC_0001 CGP X:100674491-100840932
CIL_0000YO CIL_0000YO_0002 CGP X:100820359-100874345

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113286 Cstf2-007 protein_coding Mus_musculus 0 931
ENSMUST00000113287 Cstf2-002 protein_coding Mus_musculus 0 931
ENSMUST00000033609 Cstf2-001 protein_coding Mus_musculus 0 931
ENSMUST00000149658 Cstf2-003 retained_intron Mus_musculus 0 830
ENSMUST00000144483 Cstf2-005 protein_coding Mus_musculus 0 686
ENSMUST00000148080 Cstf2-008 processed_transcript Mus_musculus 0 353
ENSMUST00000156778 Cstf2-004 protein_coding Mus_musculus 0 329

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