C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: actin, alpha 2, smooth muscle, aorta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415557 ACTA2-002 ENSG00000107796 9606 - 10:88941785-88991339 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RY CIL_0001RY_0001 CGP 10:88822132-88975153
CIL_0001IX CIL_0001IX_0001 CGP 10:88879734-88991390
CIL_0001VG CIL_0001VG_0001 CGP 10:88935074-89015785

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039631 Acta2-201 protein_coding Mus_musculus 0 647
ENSMUST00000034453 Acta1-201 protein_coding Mus_musculus 0 464
ENSDART00000052838 acta1a-001 protein_coding Danio_rerio 0 381
ENSDART00000109883 ACTC1 (2 of 2)-002 protein_coding Danio_rerio 0 375
ENSDART00000155770 ACTC1 (2 of 2)-001 protein_coding Danio_rerio 0 244

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