C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 70
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420836 HNRNPA1P70-001 ENSG00000236946 9606 + 12:68035767-68036853 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryTestisENST00000420836
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Testis
ENST00000420836 0.062±0.00 0.366±0.00 0.013±0.00 0.130±0.04 0.679±0.65 0.021±0.00 0.013±0.00 0.174±0.00 0.040±0.02 0.017±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 1029
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 974
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 723
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 723
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 717
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 706
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 678
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 654
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 610
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 340
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 222

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