C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | paired box 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000423822  |
PAX6-012 |
ENSG00000007372 |
9606 | - |
11:31801869-31817874  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008KI | CIL_0008KI_0001 | VISTA | 11:31301275-31902571 |
| CIL_0007UQ | CIL_0007UQ_0001 | VISTA | 11:31363809-31965336 |
| CIL_0008UP | CIL_0008UP_0001 | VISTA | 11:31463875-32065678 |
| CIL_0007XG | CIL_0007XG_0001 | VISTA | 11:31494904-32096873 |
| CIL_000914 | CIL_000914_0001 | VISTA | 11:31574048-32177516 |
| CIL_0007JA | CIL_0007JA_0002 | UCNEbase | 11:31639896-31819124 |
| CIL_0007PY | CIL_0007PY_0001 | VISTA | 11:31667627-32268476 |
| CIL_00096J | CIL_00096J_0001 | VISTA | 11:31730852-32331950 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000167211
|
Pax6-201 | protein_coding | Mus_musculus | 0 | 438 |
|
ENSMUST00000111085
|
Pax6-008 | protein_coding | Mus_musculus | 0 | 438 |
|
ENSMUST00000156216
|
Pax6-017 | protein_coding | Mus_musculus | 0 | 403 |
|
ENSMUST00000090391
|
Pax6-013 | protein_coding | Mus_musculus | 0 | 403 |
|
ENSMUST00000111086
|
Pax6-001 | protein_coding | Mus_musculus | 0 | 403 |
|
ENSMUST00000111083
|
Pax6-009 | protein_coding | Mus_musculus | 0 | 368 |
|
ENSMUST00000090397
|
Pax6-011 | protein_coding | Mus_musculus | 0 | 368 |
|
ENSMUST00000111082
|
Pax6-012 | protein_coding | Mus_musculus | 0 | 333 |
|
ENSMUST00000111087
|
Pax6-002 | protein_coding | Mus_musculus | 0 | 333 |
|
ENSMUST00000145744
|
Pax6-022 | processed_transcript | Mus_musculus | 0 | 302 |
|
ENSMUST00000138365
|
Pax6-021 | processed_transcript | Mus_musculus | 0 | 302 |
|
ENSMUST00000154643
|
Pax6-014 | retained_intron | Mus_musculus | 0 | 302 |
|
ENSMUST00000140173
|
Pax6-019 | processed_transcript | Mus_musculus | 0 | 302 |
|
ENSMUST00000142772
|
Pax6-015 | protein_coding | Mus_musculus | 0 | 237 |
|
ENSMUST00000123000
|
Pax6-025 | retained_intron | Mus_musculus | 0 | 231 |
|
ENSMUST00000155081
|
Pax6-023 | processed_transcript | Mus_musculus | 0 | 231 |
|
ENSMUST00000135412
|
Pax6-020 | processed_transcript | Mus_musculus | 0 | 231 |
|
ENSMUST00000154302
|
Pax6-024 | retained_intron | Mus_musculus | 0 | 231 |
|
ENSMUST00000172990
|
Pax6-010 | processed_transcript | Mus_musculus | 2.00386e-43 | 180 |
|
ENSMUST00000147923
|
Pax6-005 | processed_transcript | Mus_musculus | 5.99756e-43 | 178 |
|
ENSMUST00000153639
|
Pax6-016 | retained_intron | Mus_musculus | 3e-26 | 122 |
