C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L19 pseudogene 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424919 RPL19P21-001 ENSG00000230508 9606 + X:150993501-150994091 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000424919
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000424919 0.151±0.00 0.133±0.00 0.106±0.00 0.071±0.00 0.193±0.00 0.179±0.00 0.104±0.00 0.183±0.00 0.277±0.00 0.550±0.00 0.041±0.00 0.089±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DG CIL_0009DG_0001 VISTA X:150939220-151540580
CIL_0001AV CIL_0001AV_0001 CGP X:150980509-151181465

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122422 Rpl19-ps11-001 processed_pseudogene Mus_musculus 0 732
ENSMUST00000017548 Rpl19-001 protein_coding Mus_musculus 0 726
ENSMUST00000121059 Rpl19-ps1-001 processed_pseudogene Mus_musculus 0 721
ENSMUST00000092425 Rpl19-002 protein_coding Mus_musculus 0 719
ENSMUST00000159343 Gm16238-001 processed_pseudogene Mus_musculus 0 667
ENSMUST00000121251 Rpl19-ps12-001 processed_pseudogene Mus_musculus 0 662
ENSMUST00000167150 Rpl19-ps4-201 processed_pseudogene Mus_musculus 0 584
ENSMUST00000121130 Gm15566-001 processed_pseudogene Mus_musculus 0 553

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