C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin, gamma 1 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000431775 ACTG1P3-001 ENSG00000215388 9606 + 20:1160584-1161697 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000431775
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000431775 0.181±0.00 0.777±0.00 1.090±0.00 0.130±0.05 0.458±0.24 0.524±0.37 0.118±0.09 0.291±0.16 0.125±0.03 0.411±0.00 0.151±0.00 0.653±0.51 0.240±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 928
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 928
ENSMUST00000121430 Gm12715-001 processed_pseudogene Mus_musculus 0 917
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 863
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 828
ENSDART00000141737 actb2-001 protein_coding Danio_rerio 0 756
ENSDART00000055194 actb2-007 protein_coding Danio_rerio 0 756
ENSMUST00000078717 Lrrc58-001 protein_coding Mus_musculus 0 660
ENSMUST00000119947 Gm15725-001 transcribed_processed_pseudogene Mus_musculus 0 654
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 0 619
ENSMUST00000171419 Actb-007 protein_coding Mus_musculus 0 545
ENSMUST00000131103 Actg1-002 nonsense_mediated_decay Mus_musculus 0 542
ENSMUST00000128055 Actg1-005 protein_coding Mus_musculus 0 532
ENSMUST00000167386 Actb-003 processed_transcript Mus_musculus 0 324
ENSMUST00000141406 Actg1-007 retained_intron Mus_musculus 0 217

Loading