C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 3756
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169182 Gm3756-201 ENSMUSG00000091639 10090 - 9:31936459-31936755 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverOvaryPlacentaENSMUST00000169182
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Ovary Placenta
ENSMUST00000169182 1.337±0.05 0.461±0.00 0.587±0.32 0.326±0.00 0.266±0.00 0.074±0.02 0.848±0.22 0.482±0.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000123518 tuba1b-001 protein_coding Danio_rerio 0 327
ENSDART00000009277 tuba1a-001 protein_coding Danio_rerio 0 316
ENSDART00000077539 tuba1c-001 protein_coding Danio_rerio 0 311
ENSDART00000122569 tuba8l2-002 processed_transcript Danio_rerio 0 300
ENSDART00000040204 tuba8l2-001 protein_coding Danio_rerio 0 300
ENSDART00000113297 tuba1b-201 protein_coding Danio_rerio 0 296
ENSDART00000151822 tuba8l4-002 protein_coding Danio_rerio 0 294
ENSDART00000039443 tuba8l4-001 protein_coding Danio_rerio 0 294
ENSDART00000151271 tuba8l4-003 nonsense_mediated_decay Danio_rerio 0 207
ENST00000295766 TUBA1A-002 protein_coding Homo_sapiens 0 455
ENST00000301071 TUBA1A-001 protein_coding Homo_sapiens 0 455
ENST00000301072 TUBA1C-001 protein_coding Homo_sapiens 0 455
ENST00000332858 TUBA1B-002 retained_intron Homo_sapiens 0 466
ENST00000336023 TUBA1B-001 protein_coding Homo_sapiens 0 466
ENST00000425085 TUBAP-001 processed_pseudogene Homo_sapiens 0 254
ENST00000437634 AC012501.3-001 transcribed_processed_pseudogene Homo_sapiens 0 235
ENST00000472881 RP11-959F10.5-001 processed_pseudogene Homo_sapiens 0 220
ENST00000486997 TUBA4B-004 transcribed_unprocessed_pseudogene Homo_sapiens 0 309
ENST00000501221 RP11-447H19.1-001 processed_pseudogene Homo_sapiens 0 368
ENST00000530835 TUBAP2-001 processed_pseudogene Homo_sapiens 0 446
ENST00000541364 TUBA1C-002 protein_coding Homo_sapiens 0 455
ENST00000546918 TUBA1A-011 protein_coding Homo_sapiens 0 276
ENST00000547476 TUBA1B-007 protein_coding Homo_sapiens 0 446
ENST00000547765 TUBA1B-006 nonsense_mediated_decay Homo_sapiens 0 466
ENST00000547939 TUBA1A-009 protein_coding Homo_sapiens 0 455
ENST00000548363 TUBA1A-015 retained_intron Homo_sapiens 0 455
ENST00000549183 TUBA1C-006 protein_coding Homo_sapiens 0 455
ENST00000549870 TUBA1B-011 protein_coding Homo_sapiens 0 466
ENST00000550254 TUBA1A-014 retained_intron Homo_sapiens 0 276
ENST00000550367 TUBA1B-010 protein_coding Homo_sapiens 0 466
ENST00000550767 TUBA1A-006 protein_coding Homo_sapiens 0 455
ENST00000550811 TUBA1A-010 protein_coding Homo_sapiens 0 219
ENST00000551324 TUBA1B-008 retained_intron Homo_sapiens 0 270
ENST00000552125 TUBA1C-009 nonsense_mediated_decay Homo_sapiens 0 444
ENST00000552448 TUBA1C-003 nonsense_mediated_decay Homo_sapiens 0 455
ENST00000552924 TUBA1A-008 protein_coding Homo_sapiens 0 455
ENST00000552984 TUBA1B-009 protein_coding Homo_sapiens 0 318
ENST00000559655 RP11-83J16.3-001 processed_pseudogene Homo_sapiens 0 278

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