C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 17383
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078739 Gm17383-201 ENSMUSG00000058625 10090 + 18:82338774-82339816 pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078739
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078739 7.127±1.17 0.079±0.05 16.727±16.67 91.349±128.81 4.390±1.25 1.004±0.74 1.280±0.87 0.550±0.32 19.511±35.15 2.250±0.56 0.050±0.00 6.153±5.51 0.112±0.06 0.700±0.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000009277 tuba1a-001 protein_coding Danio_rerio 0 1177
ENSDART00000077539 tuba1c-001 protein_coding Danio_rerio 0 1171
ENSDART00000123518 tuba1b-001 protein_coding Danio_rerio 0 1103
ENSDART00000066177 tuba2-001 protein_coding Danio_rerio 0 948
ENSDART00000102715 tuba8l3-001 protein_coding Danio_rerio 0 904
ENSDART00000115157 tuba4l-201 protein_coding Danio_rerio 0 869
ENSDART00000040204 tuba8l2-001 protein_coding Danio_rerio 0 852
ENST00000248437 TUBA4A-001 protein_coding Homo_sapiens 0 1158
ENST00000295766 TUBA1A-002 protein_coding Homo_sapiens 0 1459
ENST00000301071 TUBA1A-001 protein_coding Homo_sapiens 0 1459
ENST00000301072 TUBA1C-001 protein_coding Homo_sapiens 0 1424
ENST00000332858 TUBA1B-002 retained_intron Homo_sapiens 0 1548
ENST00000336023 TUBA1B-001 protein_coding Homo_sapiens 0 1548
ENST00000392088 TUBA4A-002 protein_coding Homo_sapiens 0 1158
ENST00000398989 TUBA4A-011 protein_coding Homo_sapiens 0 604
ENST00000425085 TUBAP-001 processed_pseudogene Homo_sapiens 0 835
ENST00000437364 RP11-346M5.1-001 processed_pseudogene Homo_sapiens 0 841
ENST00000437634 AC012501.3-001 transcribed_processed_pseudogene Homo_sapiens 0 667
ENST00000445574 RP11-184J23.2-001 processed_pseudogene Homo_sapiens 0 841
ENST00000486997 TUBA4B-004 transcribed_unprocessed_pseudogene Homo_sapiens 0 941
ENST00000490341 TUBA4B-001 processed_transcript Homo_sapiens 0 941
ENST00000498660 TUBA4A-006 processed_transcript Homo_sapiens 0 713
ENST00000501221 RP11-447H19.1-001 processed_pseudogene Homo_sapiens 0 1064
ENST00000505780 CTD-2158P22.4-001 processed_pseudogene Homo_sapiens 0 477
ENST00000506481 RP11-93I21.2-001 processed_pseudogene Homo_sapiens 0 499
ENST00000530835 TUBAP2-001 processed_pseudogene Homo_sapiens 0 1404
ENST00000541364 TUBA1C-002 protein_coding Homo_sapiens 0 1424
ENST00000546918 TUBA1A-011 protein_coding Homo_sapiens 0 547
ENST00000547765 TUBA1B-006 nonsense_mediated_decay Homo_sapiens 0 1548
ENST00000547939 TUBA1A-009 protein_coding Homo_sapiens 0 577
ENST00000548363 TUBA1A-015 retained_intron Homo_sapiens 0.0000000000002 81
ENST00000548470 TUBA1C-007 retained_intron Homo_sapiens 0 1391
ENST00000549183 TUBA1C-006 protein_coding Homo_sapiens 0.0000000000002 81
ENST00000549870 TUBA1B-011 protein_coding Homo_sapiens 0.0000008 58
ENST00000550254 TUBA1A-014 retained_intron Homo_sapiens 0.0000000000002 81
ENST00000550367 TUBA1B-010 protein_coding Homo_sapiens 0 507
ENST00000550767 TUBA1A-006 protein_coding Homo_sapiens 0 1459
ENST00000551324 TUBA1B-008 retained_intron Homo_sapiens 0.000000000000005 86
ENST00000552448 TUBA1C-003 nonsense_mediated_decay Homo_sapiens 0 1424
ENST00000552924 TUBA1A-008 protein_coding Homo_sapiens 5.99756e-43 178
ENST00000559595 RP11-522B15.6-001 processed_pseudogene Homo_sapiens 0 497
ENST00000569261 TUBA8P2-001 transcribed_processed_pseudogene Homo_sapiens 2e-26 122
ENST00000611325 RP11-386G11.11-001 processed_pseudogene Homo_sapiens 0 241

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