| Transcript ID | Breast | Liver | Lung | Ovary |
|---|---|---|---|---|
| ENSMUST00000168361 | 9.213±0.00 | 2.872±0.11 | 6.002±0.00 | 8.348±3.23 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | pumilio RNA-binding family member 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000168361  |
Pum2-201 |
ENSMUSG00000020594 |
10090 | + |
12:8674681-8752581  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PO | CIL_0008PO_0002 | VISTA | 12:8085675-8687404 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003723 | IDA | RNA binding |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IEA | cytoplasm |
| GO:0006417 | IEA | regulation of translation |
| GO:0010494 | IDA | cytoplasmic stress granule |
| GO:0031965 | IEA | nuclear membrane |
| GO:0034063 | IDA | stress granule assembly |
| GO:0044822 | IEA | poly(A) RNA binding |
| GO:0048471 | ISS | perinuclear region of cytoplasm |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000122308
|
pum1-201 | protein_coding | Danio_rerio | 0 | 558 |
|
ENST00000257075
|
PUM1-001 | protein_coding | Homo_sapiens | 0 | 904 |
|
ENST00000319801
|
PUM2-201 | protein_coding | Homo_sapiens | 0 | 2503 |
|
ENST00000338086
|
PUM2-001 | protein_coding | Homo_sapiens | 0 | 5144 |
|
ENST00000361078
|
PUM2-202 | protein_coding | Homo_sapiens | 0 | 4822 |
|
ENST00000373741
|
PUM1-002 | protein_coding | Homo_sapiens | 0 | 937 |
|
ENST00000373742
|
PUM1-011 | protein_coding | Homo_sapiens | 0 | 913 |
|
ENST00000373747
|
PUM1-004 | protein_coding | Homo_sapiens | 0 | 946 |
|
ENST00000403432
|
PUM2-002 | protein_coding | Homo_sapiens | 0 | 5144 |
|
ENST00000420234
|
PUM2-007 | processed_transcript | Homo_sapiens | 0 | 621 |
|
ENST00000424085
|
PUM1-014 | protein_coding | Homo_sapiens | 0 | 848 |
|
ENST00000424110
|
PUM2-009 | protein_coding | Homo_sapiens | 0 | 228 |
|
ENST00000426105
|
PUM1-010 | protein_coding | Homo_sapiens | 0 | 937 |
|
ENST00000429419
|
PUM2-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 702 |
|
ENST00000432105
|
PUM2-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 534 |
|
ENST00000440538
|
PUM1-013 | protein_coding | Homo_sapiens | 0 | 787 |
|
ENST00000440577
|
PUM2-003 | protein_coding | Homo_sapiens | 0 | 2082 |
|
ENST00000442400
|
PUM2-006 | protein_coding | Homo_sapiens | 0 | 1445 |
|
ENST00000446940
|
PUM2-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 390 |
|
ENST00000498419
|
PUM1-005 | protein_coding | Homo_sapiens | 0 | 996 |
|
ENST00000525843
|
PUM1-012 | protein_coding | Homo_sapiens | 0 | 706 |
|
ENST00000530669
|
PUM1-023 | nonsense_mediated_decay | Homo_sapiens | 0 | 270 |
