C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Y box binding protein 1 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000445822 YBX1P1-001 ENSG00000224861 9606 - 14:66012830-66013789 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000445822
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000445822 0.451±0.00 0.299±0.00 0.382±0.00 0.093±0.00 0.157±0.00 0.171±0.14 0.082±0.00 0.131±0.05 0.090±0.05 0.066±0.00 0.389±0.35 0.269±0.31 0.070±0.04 0.358±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KA CIL_0001KA_0002 CGP 14:65410592-67181803

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079644 Ybx1-001 protein_coding Mus_musculus 0 1480
ENSMUST00000117567 Gm11560-001 processed_pseudogene Mus_musculus 0 1304
ENSMUST00000127737 Ybx1-004 protein_coding Mus_musculus 0 959
ENSMUST00000123576 E130201H02Rik-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000119046 Gm15808-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000145976 Ybx1-007 processed_transcript Mus_musculus 0 374
ENSMUST00000142884 Ybx1-005 processed_transcript Mus_musculus 0 342
ENSMUST00000139897 Ybx1-003 processed_transcript Mus_musculus 0 342
ENSMUST00000152733 Ybx1-002 processed_transcript Mus_musculus 0 294
ENSMUST00000144992 Ybx1-006 processed_transcript Mus_musculus 0 191

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