C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cyclin L1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000464316 CCNL1-006 ENSG00000163660 9606 - 3:157147795-157154666 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartLungMuscleTestisENST00000464316
Transcript ID Adrenal Breast Heart Lung Muscle Testis
ENST00000464316 6.841±0.00 2.988±0.00 0.813±0.00 6.735±0.00 0.728±0.00 0.798±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028X CIL_00028X_0001 CGP 3:156825481-157160760
CIL_00081H CIL_00081H_0001 VISTA 3:156827989-157431369
CIL_00028W CIL_00028W_0001 CGP 3:157146508-157533619

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029416 Ccnl1-001 protein_coding Mus_musculus 0 1965
ENSMUST00000129002 Ccnl1-002 nonsense_mediated_decay Mus_musculus 0 1965
ENSMUST00000135719 Ccnl1-003 nonsense_mediated_decay Mus_musculus 0 1897
ENSMUST00000154585 Ccnl1-007 nonsense_mediated_decay Mus_musculus 0 1853
ENSMUST00000142153 Ccnl1-005 retained_intron Mus_musculus 0 1358
ENSMUST00000122919 Ccnl1-004 retained_intron Mus_musculus 0 1351
ENSMUST00000144810 Ccnl1-009 nonsense_mediated_decay Mus_musculus 0 641
ENSMUST00000132998 Ccnl1-012 retained_intron Mus_musculus 0 508
ENSMUST00000150304 Ccnl1-013 retained_intron Mus_musculus 0 448
ENSMUST00000149729 Ccnl1-014 retained_intron Mus_musculus 0 363
ENSMUST00000146284 Ccnl1-011 retained_intron Mus_musculus 0 270
ENSMUST00000149160 Ccnl1-006 retained_intron Mus_musculus 0 268
ENSMUST00000148623 Ccnl1-008 retained_intron Mus_musculus 0 213
ENSMUST00000145186 Ccnl1-010 nonsense_mediated_decay Mus_musculus 0 213

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