C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autophagy related 4B, cysteine peptidase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000465399 ATG4B-016 ENSG00000168397 9606 + 2:241637693-241655444 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000465399
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000465399 8.595±0.00 11.727±0.00 12.513±0.00 9.724±0.00 2.531±0.00 6.200±0.00 9.821±0.00 9.547±0.00 5.485±0.00 6.438±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004U9 CIL_0004U9_0002 CGP 2:241558721-241637449
CIL_0003ST CIL_0003ST_0001 CGP 2:241584405-241673857
CIL_0004UA CIL_0004UA_0002 CGP 2:241637213-241686991

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027502 Atg4b-001 protein_coding Mus_musculus 0 628
ENSMUST00000135762 Atg4b-002 retained_intron Mus_musculus 0 606
ENSMUST00000149436 Atg4b-003 protein_coding Mus_musculus 0 566
ENSMUST00000187824 Atg4b-005 protein_coding Mus_musculus 0 228

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