C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lactate dehydrogenase A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469976 LDHA-006 ENSG00000134333 9606 + 11:18394561-18397398 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000445 CIL_000445_0001 CGP 11:18322295-18408425
CIL_000369 CIL_000369_0001 CGP 11:18394388-18452058

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124696 Ldha-005 retained_intron Mus_musculus 0 193
ENSMUST00000132157 Ldha-008 retained_intron Mus_musculus 5.04467e-44 182
ENSMUST00000005051 Ldha-002 protein_coding Mus_musculus 5.04467e-44 182
ENSMUST00000133062 Ldha-007 processed_transcript Mus_musculus 5.04467e-44 182
ENSMUST00000092621 Ldha-006 protein_coding Mus_musculus 5.04467e-44 182
ENSMUST00000125862 Ldha-004 processed_transcript Mus_musculus 5.04467e-44 182
ENSMUST00000048209 Ldha-001 protein_coding Mus_musculus 5.04467e-44 182
ENSMUST00000147535 Ldha-003 protein_coding Mus_musculus 5.04467e-44 182
ENSMUST00000119515 Gm11814-001 processed_pseudogene Mus_musculus 8.00001e-42 174
ENSMUST00000118722 Ldha-ps2-001 processed_pseudogene Mus_musculus 2e-38 163
ENSMUST00000188353 RP24-77I21.1-001 processed_pseudogene Mus_musculus 2e-32 143
ENSMUST00000117722 Gm14676-001 processed_pseudogene Mus_musculus 3e-31 139
ENSMUST00000119390 Ldha-ps-001 processed_pseudogene Mus_musculus 1e-30 137
ENSMUST00000187574 RP23-251N10.2-001 processed_pseudogene Mus_musculus 3e-26 122

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