C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000421799} | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000470747  |
HOXA10-HOXA9-001 |
ENSG00000257184 |
9606 | - |
7:27163535-27180013  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007OD | CIL_0007OD_0002 | UCNEbase | 7:26506344-27606703 |
| CIL_0008QL | CIL_0008QL_0001 | VISTA | 7:26816432-27417045 |
| CIL_000911 | CIL_000911_0001 | VISTA | 7:26910239-27511438 |
| CIL_000811 | CIL_000811_0001 | VISTA | 7:26948649-27549872 |
| CIL_00097P | CIL_00097P_0001 | VISTA | 7:27075631-27678581 |
| CIL_0003PA | CIL_0003PA_0001 | CGP | 7:27153716-27175180 |
| CIL_0006I0 | CIL_0006I0_0002 | CGP | 7:27162435-27180013 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0005634 | IEA | nucleus |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0043565 | IEA | sequence-specific DNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000154641
|
Hoxa9-004 | processed_transcript | Mus_musculus | 0 | 571 |
|
ENSMUST00000114425
|
Hoxa9-002 | protein_coding | Mus_musculus | 0 | 569 |
|
ENSMUST00000048680
|
Hoxa9-001 | protein_coding | Mus_musculus | 0 | 569 |
|
ENSMUST00000156540
|
Hoxa9-003 | processed_transcript | Mus_musculus | 0 | 377 |
|
ENSMUST00000121043
|
Hoxa10-004 | protein_coding | Mus_musculus | 0 | 320 |
|
ENSMUST00000142611
|
Hoxa10-003 | processed_transcript | Mus_musculus | 0 | 202 |
|
ENSDART00000153363
|
protein_coding | Danio_rerio | 0.0000000000008 | 79 | |
|
ENSMUST00000001709
|
Hoxc5-001 | protein_coding | Mus_musculus | 0.00000000004 | 73 |
|
ENSMUST00000174869
|
Hoxc5-002 | processed_transcript | Mus_musculus | 0.00000000004 | 73 |
|
ENSDART00000057730
|
dbx2-201 | protein_coding | Danio_rerio | 0.000000006 | 66 |
