C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: H6 family homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000153363 ENSDARG00000096716 7955 + 12:50655502-50656548 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverENSDART00000153363
Transcript ID Brain Heart Liver
ENSDART00000153363 0.180±0.00 0.032±0.00 0.033±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001536 Nkx2-1-002 protein_coding Mus_musculus 0.0002 53
ENSMUST00000015723 Nkx2-5-001 protein_coding Mus_musculus 0.0000002 62
ENSMUST00000046093 Hmx3-001 protein_coding Mus_musculus 0 239
ENSMUST00000048680 Hoxa9-001 protein_coding Mus_musculus 0.0000000002 73
ENSMUST00000067020 Nkx2-4-001 protein_coding Mus_musculus 0.0001 53
ENSMUST00000072631 Nkx2-9-001 protein_coding Mus_musculus 0.00008 53
ENSMUST00000114425 Hoxa9-002 protein_coding Mus_musculus 0.00000000004 73
ENSMUST00000154641 Hoxa9-004 processed_transcript Mus_musculus 0.00000000003 73
ENSMUST00000178477 Nkx2-1-001 protein_coding Mus_musculus 0.0001 53
ENST00000325017 NKX2-6-001 protein_coding Homo_sapiens 0.000001 58
ENST00000329198 NKX2-5-001 protein_coding Homo_sapiens 0.0000002 62
ENST00000343483 HOXA9-001 protein_coding Homo_sapiens 0.000000000002 79
ENST00000351817 NKX2-4-001 protein_coding Homo_sapiens 0.000000005 68
ENST00000354822 NKX2-1-002 protein_coding Homo_sapiens 0.00000007 64
ENST00000357878 HMX3-001 protein_coding Homo_sapiens 0 267
ENST00000377142 NKX2-2-001 protein_coding Homo_sapiens 0.0001 53
ENST00000396345 HOXA9-003 protein_coding Homo_sapiens 0.0000000000008 79
ENST00000424406 NKX2-5-003 protein_coding Homo_sapiens 0.0000001 62
ENST00000470747 HOXA10-HOXA9-001 protein_coding Homo_sapiens 0.0000000000008 79
ENST00000487384 HOXA9-004 processed_transcript Homo_sapiens 0.0000000000007 79
ENST00000497089 HOXA9-002 processed_transcript Homo_sapiens 0.000000000001 79
ENST00000498187 NKX2-1-001 protein_coding Homo_sapiens 0.00000007 64
ENST00000518149 NKX2-1-004 protein_coding Homo_sapiens 0.00000008 64
ENST00000521848 NKX2-5-004 protein_coding Homo_sapiens 0.0000001 62
ENST00000522719 NKX2-1-003 protein_coding Homo_sapiens 0.00000004 64

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