C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin L1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000471247 CCNL1-008 ENSG00000163660 9606 - 3:157147796-157152501 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartKidneyLiverLungOvaryPlacentaENST00000471247
Transcript ID Adrenal Breast Heart Kidney Liver Lung Ovary Placenta
ENST00000471247 9.396±0.00 4.003±0.00 0.657±0.00 3.122±0.00 1.560±0.00 6.636±0.00 11.373±2.15 1.355±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028X CIL_00028X_0001 CGP 3:156825481-157160760
CIL_00081H CIL_00081H_0001 VISTA 3:156827989-157431369
CIL_00028W CIL_00028W_0001 CGP 3:157146508-157533619

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029416 Ccnl1-001 protein_coding Mus_musculus 0 1555
ENSMUST00000154585 Ccnl1-007 nonsense_mediated_decay Mus_musculus 0 1555
ENSMUST00000129002 Ccnl1-002 nonsense_mediated_decay Mus_musculus 0 1555
ENSMUST00000135719 Ccnl1-003 nonsense_mediated_decay Mus_musculus 0 1487
ENSMUST00000122919 Ccnl1-004 retained_intron Mus_musculus 0 1351
ENSMUST00000142153 Ccnl1-005 retained_intron Mus_musculus 0 1059
ENSMUST00000149160 Ccnl1-006 retained_intron Mus_musculus 0 933
ENSMUST00000145186 Ccnl1-010 nonsense_mediated_decay Mus_musculus 0 451
ENSMUST00000149729 Ccnl1-014 retained_intron Mus_musculus 0 363
ENSMUST00000132998 Ccnl1-012 retained_intron Mus_musculus 1.96182e-44 185
ENSMUST00000150304 Ccnl1-013 retained_intron Mus_musculus 2e-39 169
ENSMUST00000144810 Ccnl1-009 nonsense_mediated_decay Mus_musculus 2e-39 169

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