C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | sodium channel, voltage-gated, type IX, alpha subunit | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000472119  |
SCN9A-006 |
ENSG00000169432 |
9606 | - |
2:166302619-166305920  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006CK | CIL_0006CK_0001 | CGP | 2:165989160-166375993 |
| CIL_0006CV | CIL_0006CV_0001 | CGP | 2:166195185-166494247 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000164384
|
Scn9a-202 | protein_coding | Mus_musculus | 0 | 527 |
|
ENSMUST00000112354
|
Scn9a-002 | protein_coding | Mus_musculus | 0 | 527 |
|
ENSMUST00000100064
|
Scn9a-001 | protein_coding | Mus_musculus | 0 | 527 |
|
ENSMUST00000100063
|
Scn9a-201 | protein_coding | Mus_musculus | 0 | 497 |
|
ENSMUST00000100067
|
Scn2a1-201 | protein_coding | Mus_musculus | 0 | 405 |
|
ENSMUST00000028377
|
Scn2a1-001 | protein_coding | Mus_musculus | 0 | 405 |
|
ENSMUST00000126837
|
Scn3a-002 | protein_coding | Mus_musculus | 0 | 348 |
|
ENSMUST00000082209
|
Scn8a-201 | protein_coding | Mus_musculus | 0 | 289 |
|
ENSMUST00000138368
|
Scn2a1-003 | processed_transcript | Mus_musculus | 4e-36 | 156 |
