Transcript ID | Adipose | Brain | Breast | Colon | Heart | Liver | Ovary | Testis |
---|---|---|---|---|---|---|---|---|
ENSMUST00000028377 | 0.134±0.00 | 2.736±1.16 | 0.165±0.06 | 0.181±0.02 | 0.075±0.00 | 0.016±0.01 | 0.286±0.03 | 0.127±0.02 |
Transcript Info |
||||||
Description: | sodium channel, voltage-gated, type II, alpha 1 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000028377 | Scn2a1-001 | ENSMUSG00000075318 | 10090 | + | 2:65620857-65767447 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0006CO | CIL_0006CO_0002 | CGP | 2:65457118-65767447 |
CIL_0006CJ | CIL_0006CJ_0002 | CGP | 2:65620857-66031546 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0001518 | TAS | voltage-gated sodium channel complex |
GO:0005248 | IDA | voltage-gated sodium channel activity |
GO:0006814 | IDA | sodium ion transport |
GO:0007399 | IMP | nervous system development |
GO:0008627 | IMP | intrinsic apoptotic signaling pathway in response to osmotic stress |
GO:0014704 | IDA | intercalated disc |
GO:0016020 | IDA | membrane |
GO:0019228 | IBA | neuronal action potential |
GO:0030315 | IDA | T-tubule |
GO:0030424 | IDA | axon |
GO:0033270 | IDA | paranode region of axon |
GO:0034765 | IEA | regulation of ion transmembrane transport |
GO:0035725 | IEA | sodium ion transmembrane transport |
GO:0051402 | IMP | neuron apoptotic process |
GO:0086010 | IBA | membrane depolarization during action potential |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSDART00000022761 | scn8ab-201 | protein_coding | Danio_rerio | 0 | 1777 |
ENSDART00000151299 | scn8ab-001 | protein_coding | Danio_rerio | 0 | 1777 |
ENSDART00000104004 | scn4ab-201 | protein_coding | Danio_rerio | 0 | 822 |
ENSDART00000044157 | scn4ab-001 | protein_coding | Danio_rerio | 0 | 819 |
ENSDART00000083256 | scn12aa-201 | protein_coding | Danio_rerio | 0 | 811 |
ENST00000283254 | SCN3A-001 | protein_coding | Homo_sapiens | 0 | 5001 |
ENST00000283256 | SCN2A-001 | protein_coding | Homo_sapiens | 0 | 7583 |
ENST00000302328 | SCN11A-001 | protein_coding | Homo_sapiens | 0 | 296 |
ENST00000303354 | SCN9A-201 | protein_coding | Homo_sapiens | 0 | 2386 |
ENST00000303395 | SCN1A-001 | protein_coding | Homo_sapiens | 0 | 3304 |
ENST00000333535 | SCN5A-014 | protein_coding | Homo_sapiens | 0 | 1079 |
ENST00000354534 | SCN8A-001 | protein_coding | Homo_sapiens | 0 | 472 |
ENST00000355133 | SCN8A-005 | protein_coding | Homo_sapiens | 0 | 472 |
ENST00000360093 | SCN3A-201 | protein_coding | Homo_sapiens | 0 | 5101 |
ENST00000375405 | SCN1A-002 | protein_coding | Homo_sapiens | 0 | 4778 |
ENST00000375427 | SCN2A-002 | protein_coding | Homo_sapiens | 0 | 7692 |
ENST00000375437 | SCN2A-201 | protein_coding | Homo_sapiens | 0 | 7672 |
ENST00000409050 | SCN1A-003 | protein_coding | Homo_sapiens | 0 | 3306 |
ENST00000409101 | SCN3A-002 | protein_coding | Homo_sapiens | 0 | 3387 |
ENST00000409435 | SCN9A-004 | protein_coding | Homo_sapiens | 0 | 2386 |
ENST00000409672 | SCN9A-001 | protein_coding | Homo_sapiens | 0 | 2730 |
ENST00000413689 | SCN5A-001 | protein_coding | Homo_sapiens | 0 | 1079 |
ENST00000414099 | SCN5A-004 | protein_coding | Homo_sapiens | 0 | 809 |
ENST00000423058 | SCN1A-201 | protein_coding | Homo_sapiens | 0 | 3304 |
ENST00000423572 | SCN5A-003 | protein_coding | Homo_sapiens | 0 | 1079 |
ENST00000424833 | SCN2A-003 | protein_coding | Homo_sapiens | 0 | 2183 |
ENST00000425664 | SCN5A-201 | protein_coding | Homo_sapiens | 0 | 809 |
ENST00000435607 | SCN4A-201 | protein_coding | Homo_sapiens | 0 | 1199 |
ENST00000440431 | SCN3A-004 | protein_coding | Homo_sapiens | 0 | 1628 |
ENST00000443581 | SCN5A-202 | protein_coding | Homo_sapiens | 0 | 1079 |
ENST00000444237 | SCN11A-002 | protein_coding | Homo_sapiens | 0 | 281 |
ENST00000449082 | SCN10A-001 | protein_coding | Homo_sapiens | 0 | 784 |
ENST00000449557 | SCN5A-010 | protein_coding | Homo_sapiens | 0 | 1079 |
ENST00000450102 | SCN5A-008 | protein_coding | Homo_sapiens | 0 | 1079 |
ENST00000451551 | SCN5A-203 | protein_coding | Homo_sapiens | 0 | 1079 |
ENST00000453007 | SCN3A-003 | protein_coding | Homo_sapiens | 0 | 649 |
ENST00000455624 | SCN5A-002 | protein_coding | Homo_sapiens | 0 | 564 |
ENST00000456224 | SCN11A-003 | protein_coding | Homo_sapiens | 0 | 296 |
ENST00000465043 | SCN3A-007 | processed_transcript | Homo_sapiens | 0 | 254 |
ENST00000472119 | SCN9A-006 | retained_intron | Homo_sapiens | 0 | 405 |
ENST00000473295 | SCN1A-005 | retained_intron | Homo_sapiens | 0 | 287 |
ENST00000480032 | SCN2A-005 | retained_intron | Homo_sapiens | 0 | 4872 |
ENST00000484898 | SCN3A-008 | processed_transcript | Homo_sapiens | 5.60519e-45 | 183 |
ENST00000486878 | SCN2A-004 | retained_intron | Homo_sapiens | 0 | 573 |
ENST00000507401 | SCN1A-007 | retained_intron | Homo_sapiens | 0 | 331 |
ENST00000545061 | SCN8A-201 | protein_coding | Homo_sapiens | 0 | 472 |
ENST00000578147 | SCN4A-001 | protein_coding | Homo_sapiens | 0 | 1188 |
ENST00000599343 | SCN8A-202 | protein_coding | Homo_sapiens | 0 | 477 |