Transcript ID | Adrenal | Bladder | Colon | Kidney | Liver | Ovary | Placenta |
---|---|---|---|---|---|---|---|
ENSMUST00000100063 | 0.076±0.00 | 0.038±0.00 | 0.045±0.00 | 0.020±0.01 | 0.005±0.01 | 0.022±0.01 | 0.005±0.00 |
Transcript Info |
||||||
Description: | sodium channel, voltage-gated, type IX, alpha | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000100063 | Scn9a-201 | ENSMUSG00000075316 | 10090 | - | 2:66480080-66634952 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0006CK | CIL_0006CK_0002 | CGP | 2:66270781-66634962 |
CIL_0006CV | CIL_0006CV_0002 | CGP | 2:66480080-66784914 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0001518 | IEA | voltage-gated sodium channel complex |
GO:0005248 | IBA | voltage-gated sodium channel activity |
GO:0005886 | IBA | plasma membrane |
GO:0006954 | IMP | inflammatory response |
GO:0009636 | IDA | response to toxic substance |
GO:0009791 | IMP | post-embryonic development |
GO:0019228 | IBA | neuronal action potential |
GO:0034765 | IEA | regulation of ion transmembrane transport |
GO:0035725 | IBA | sodium ion transmembrane transport |
GO:0048266 | IMP | behavioral response to pain |
GO:0086010 | IBA | membrane depolarization during action potential |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSDART00000083256 | scn12aa-201 | protein_coding | Danio_rerio | 0 | 760 |
ENSDART00000022761 | scn8ab-201 | protein_coding | Danio_rerio | 0 | 516 |
ENSDART00000151299 | scn8ab-001 | protein_coding | Danio_rerio | 0 | 516 |
ENSDART00000090994 | scn1lab-201 | protein_coding | Danio_rerio | 0 | 466 |
ENSDART00000151247 | scn1lab-001 | protein_coding | Danio_rerio | 0 | 466 |
ENSDART00000106534 | scn4aa-001 | protein_coding | Danio_rerio | 0 | 412 |
ENSDART00000011718 | scn1a-201 | protein_coding | Danio_rerio | 0 | 340 |
ENSDART00000090979 | scn1a-202 | protein_coding | Danio_rerio | 0 | 340 |
ENST00000283254 | SCN3A-001 | protein_coding | Homo_sapiens | 0 | 1864 |
ENST00000283256 | SCN2A-001 | protein_coding | Homo_sapiens | 0 | 2612 |
ENST00000302328 | SCN11A-001 | protein_coding | Homo_sapiens | 0 | 244 |
ENST00000303354 | SCN9A-201 | protein_coding | Homo_sapiens | 0 | 4647 |
ENST00000303395 | SCN1A-001 | protein_coding | Homo_sapiens | 0 | 1788 |
ENST00000333535 | SCN5A-014 | protein_coding | Homo_sapiens | 0 | 966 |
ENST00000354534 | SCN8A-001 | protein_coding | Homo_sapiens | 0 | 383 |
ENST00000355133 | SCN8A-005 | protein_coding | Homo_sapiens | 0 | 383 |
ENST00000360093 | SCN3A-201 | protein_coding | Homo_sapiens | 0 | 1864 |
ENST00000375405 | SCN1A-002 | protein_coding | Homo_sapiens | 0 | 1788 |
ENST00000375427 | SCN2A-002 | protein_coding | Homo_sapiens | 0 | 2612 |
ENST00000375437 | SCN2A-201 | protein_coding | Homo_sapiens | 0 | 2612 |
ENST00000409050 | SCN1A-003 | protein_coding | Homo_sapiens | 0 | 1788 |
ENST00000409101 | SCN3A-002 | protein_coding | Homo_sapiens | 0 | 1864 |
ENST00000409435 | SCN9A-004 | protein_coding | Homo_sapiens | 0 | 4484 |
ENST00000409672 | SCN9A-001 | protein_coding | Homo_sapiens | 0 | 6807 |
ENST00000409855 | SCN7A-001 | protein_coding | Homo_sapiens | 0 | 206 |
ENST00000413689 | SCN5A-001 | protein_coding | Homo_sapiens | 0 | 966 |
ENST00000414099 | SCN5A-004 | protein_coding | Homo_sapiens | 0 | 782 |
ENST00000423058 | SCN1A-201 | protein_coding | Homo_sapiens | 0 | 1788 |
ENST00000423572 | SCN5A-003 | protein_coding | Homo_sapiens | 0 | 966 |
ENST00000424326 | SCN7A-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 206 |
ENST00000425664 | SCN5A-201 | protein_coding | Homo_sapiens | 0 | 782 |
ENST00000440431 | SCN3A-004 | protein_coding | Homo_sapiens | 0 | 776 |
ENST00000443581 | SCN5A-202 | protein_coding | Homo_sapiens | 0 | 966 |
ENST00000444237 | SCN11A-002 | protein_coding | Homo_sapiens | 0 | 243 |
ENST00000449082 | SCN10A-001 | protein_coding | Homo_sapiens | 0 | 569 |
ENST00000449557 | SCN5A-010 | protein_coding | Homo_sapiens | 0 | 966 |
ENST00000450102 | SCN5A-008 | protein_coding | Homo_sapiens | 0 | 966 |
ENST00000451551 | SCN5A-203 | protein_coding | Homo_sapiens | 0 | 966 |
ENST00000452182 | SCN9A-003 | protein_coding | Homo_sapiens | 0 | 1506 |
ENST00000453007 | SCN3A-003 | protein_coding | Homo_sapiens | 0 | 337 |
ENST00000454569 | SCN9A-002 | protein_coding | Homo_sapiens | 0 | 1524 |
ENST00000455624 | SCN5A-002 | protein_coding | Homo_sapiens | 0 | 531 |
ENST00000456224 | SCN11A-003 | protein_coding | Homo_sapiens | 0 | 244 |
ENST00000472119 | SCN9A-006 | retained_intron | Homo_sapiens | 0 | 497 |
ENST00000473295 | SCN1A-005 | retained_intron | Homo_sapiens | 0 | 248 |
ENST00000507401 | SCN1A-007 | retained_intron | Homo_sapiens | 7e-28 | 128 |
ENST00000545061 | SCN8A-201 | protein_coding | Homo_sapiens | 0 | 383 |
ENST00000599343 | SCN8A-202 | protein_coding | Homo_sapiens | 0 | 388 |
ENST00000619410 | SCN7A-201 | protein_coding | Homo_sapiens | 0 | 206 |
ENST00000621965 | SCN7A-202 | protein_coding | Homo_sapiens | 0 | 206 |