C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fascin actin-bundling protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473330 FSCN1-002 ENSG00000075618 9606 + 7:5602872-5606654 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryENST00000473330
Transcript ID Muscle Ovary
ENST00000473330 0.274±0.00 2.336±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000854 CIL_000854_0001 VISTA 7:5332287-5936913
CIL_0002V8 CIL_0002V8_0001 CGP 7:5527151-5606655
CIL_00027J CIL_00027J_0002 CGP 7:5592823-5781739

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031565 Fscn1-001 protein_coding Mus_musculus 0 826
ENSMUST00000129306 Fscn1-002 protein_coding Mus_musculus 0 806
ENSMUST00000137552 Fscn1-005 protein_coding Mus_musculus 0 645
ENSMUST00000139131 Fscn1-004 protein_coding Mus_musculus 0 547
ENSMUST00000135293 Fscn1-006 retained_intron Mus_musculus 0 483
ENSMUST00000150622 Fscn1-003 protein_coding Mus_musculus 0 405

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