C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487411 STX4-004 ENSG00000103496 9606 + 16:31033546-31039803 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastLungMuscleOvaryTestisENST00000487411
Transcript ID Adipose Adrenal Breast Lung Muscle Ovary Testis
ENST00000487411 8.295±0.00 14.594±0.00 10.706±0.00 6.281±5.36 2.007±0.00 12.845±3.40 3.910±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XW CIL_0001XW_0001 CGP 16:30989256-31042975
CIL_0001UH CIL_0001UH_0001 CGP 16:31032889-31074320

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121705 Stx4a-002 protein_coding Mus_musculus 0 795
ENSMUST00000033075 Stx4a-001 protein_coding Mus_musculus 0 795
ENSMUST00000142849 Stx4a-008 retained_intron Mus_musculus 0 616
ENSMUST00000156537 Stx4a-004 nonsense_mediated_decay Mus_musculus 0 579
ENSMUST00000123180 Stx4a-007 retained_intron Mus_musculus 0 403
ENSMUST00000152310 Stx4a-003 processed_transcript Mus_musculus 0 342
ENSMUST00000138294 Stx4a-006 retained_intron Mus_musculus 0 337
ENSMUST00000138399 Stx4a-005 retained_intron Mus_musculus 0 263

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