C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L5 pseudogene 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487833 RPL5P33-001 ENSG00000243521 9606 + 17:50847950-50849270 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverOvaryTestisENST00000487833
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Ovary Testis
ENST00000487833 0.049±0.00 0.088±0.00 0.037±0.00 0.036±0.00 0.080±0.00 0.024±0.00 0.037±0.00 0.011±0.00 0.014±0.00 0.078±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KM CIL_0007KM_0001 UCNEbase 17:50750455-50862724
CIL_0004X3 CIL_0004X3_0003 CGP 17:50834650-50867978

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071641 Gm15500-002 processed_transcript Mus_musculus 0 815
ENSMUST00000082223 Rpl5-001 protein_coding Mus_musculus 0 815
ENSMUST00000071523 Gm15500-001 transcribed_processed_pseudogene Mus_musculus 0 813
ENSMUST00000121367 Rpl5-ps1-001 processed_pseudogene Mus_musculus 0 769
ENSMUST00000119057 Rpl5-ps2-001 processed_pseudogene Mus_musculus 0 752
ENSMUST00000153590 Rpl5-002 protein_coding Mus_musculus 0 590
ENSMUST00000123183 Rpl5-003 retained_intron Mus_musculus 0 490
ENSMUST00000129944 Rpl5-004 retained_intron Mus_musculus 0 255

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