C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | Rho guanine nucleotide exchange factor (GEF) 39 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000490638  |
ARHGEF39-004 |
ENSG00000137135 |
9606 | - |
9:35658875-35675866  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00072Q | CIL_00072Q_0001 | CGP | 9:35649295-35661511 |
| CIL_00072N | CIL_00072N_0001 | CGP | 9:35658290-35675866 |
| CIL_00072O | CIL_00072O_0001 | CGP | 9:35658875-35681159 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005089 | IEA | Rho guanyl-nucleotide exchange factor activity |
| GO:0005886 | IDA | plasma membrane |
| GO:0030335 | IDA | positive regulation of cell migration |
| GO:0032321 | IEA | positive regulation of Rho GTPase activity |
| GO:0035023 | IEA | regulation of Rho protein signal transduction |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000054538
|
Arhgef39-001 | protein_coding | Mus_musculus | 0 | 931 |
|
ENSMUST00000154905
|
Arhgef39-006 | processed_transcript | Mus_musculus | 0 | 564 |
|
ENSMUST00000125834
|
Arhgef39-004 | processed_transcript | Mus_musculus | 0 | 527 |
|
ENSMUST00000146781
|
Arhgef39-005 | processed_transcript | Mus_musculus | 0 | 411 |
|
ENSMUST00000147124
|
Arhgef39-007 | processed_transcript | Mus_musculus | 0 | 326 |
|
ENSMUST00000136005
|
Arhgef39-010 | protein_coding | Mus_musculus | 0 | 326 |
|
ENSMUST00000128754
|
Arhgef39-002 | processed_transcript | Mus_musculus | 0 | 326 |
