C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S12 pseudogene 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492017 RPS12P26-001 ENSG00000225193 9606 + 15:90206572-90206967 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000492017
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000492017 0.076±0.00 0.544±0.00 1.848±0.00 0.702±0.15 2.043±1.92 1.020±0.80 0.484±0.41 0.508±0.19 0.134±0.06 0.938±0.75 0.424±0.00 0.790±0.52 0.073±0.00 0.213±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079J CIL_00079J_0001 CGP 15:90083045-90229679
CIL_0008FE CIL_0008FE_0001 VISTA 15:90100149-90701385
CIL_0000SV CIL_0000SV_0001 CGP 15:90160604-90234047

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117447 Rps12-ps10-001 processed_pseudogene Mus_musculus 0 462
ENSMUST00000183090 Rps12l1-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000073926 Rps12-201 protein_coding Mus_musculus 0 457
ENSMUST00000086764 Rps12-ps3-201 protein_coding Mus_musculus 0 457
ENSMUST00000139165 Rps12-ps9-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000119773 Rps12-ps19-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000179356 Rps12-ps14-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000178365 Rps12-ps13-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000179567 Rps12-ps15-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000179020 Rps12-ps12-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000178427 Rps12-ps11-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000118529 Rps12-ps16-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000179067 Rps12-ps17-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000179420 Rps12-ps18-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000179239 Rps12-ps6-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000118272 Rps12-ps5-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000182321 Rps12l2-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000117169 Rps12-ps7-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000117751 Rps12-ps26-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000118668 Gm12677-001 processed_pseudogene Mus_musculus 0.000002 57

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