C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actinin, alpha 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492634 ACTN2-004 ENSG00000077522 9606 + 1:236686527-236744769 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000492634
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000492634 0.075±0.00 0.176±0.00 4.991±4.79 0.298±0.00 350.503±0.00 0.095±0.08 0.034±0.00 1.394±0.00 436.824±0.00 0.193±0.00 0.357±0.29 5.325±2.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097Y CIL_00097Y_0001 VISTA 1:236338883-236940914

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168193 Actn2-201 protein_coding Mus_musculus 0 1037
ENSMUST00000064204 Actn2-001 protein_coding Mus_musculus 0 1037
ENSMUST00000110616 Actn2-002 protein_coding Mus_musculus 0 614
ENSDART00000005682 actn3a-001 protein_coding Danio_rerio 0 544
ENSDART00000001649 actn3b-001 protein_coding Danio_rerio 0 542
ENSDART00000100217 actn1-201 protein_coding Danio_rerio 0 457
ENSDART00000123678 actn1-202 protein_coding Danio_rerio 0 457
ENSDART00000133740 actn1-002 nonsense_mediated_decay Danio_rerio 0 457
ENSDART00000140243 actn1-001 protein_coding Danio_rerio 0 457
ENSMUST00000006626 Actn3-001 protein_coding Mus_musculus 0 444
ENSDART00000032887 ACTN4 (1 of 3)-201 protein_coding Danio_rerio 0 302

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