C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Meis homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495021 MEIS1-016 ENSG00000143995 9606 + 2:66439321-66572759 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000495021
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000495021 0.809±0.00 1.208±0.00 1.289±0.00 1.714±0.57 5.831±2.03 1.683±0.68 2.744±2.22 2.213±0.44 0.234±0.00 10.526±9.49 2.166±0.35 3.321±2.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ET CIL_0008ET_0001 VISTA 2:65870410-66471811
CIL_00085V CIL_00085V_0001 VISTA 2:65983424-66584663
CIL_0007JR CIL_0007JR_0003 UCNEbase 2:66138106-68180953
CIL_0008VO CIL_0008VO_0001 VISTA 2:66222407-66823799
CIL_000949 CIL_000949_0001 VISTA 2:66235383-66837956
CIL_00094L CIL_00094L_0001 VISTA 2:66397571-66998983

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068264 Meis1-001 protein_coding Mus_musculus 0 2839
ENSMUST00000118661 Meis1-006 processed_transcript Mus_musculus 0 2409
ENSMUST00000185131 Meis1-201 protein_coding Mus_musculus 0 1465
ENSMUST00000177417 Meis1-008 protein_coding Mus_musculus 0 1465
ENSMUST00000102878 Meis1-004 nonsense_mediated_decay Mus_musculus 0 1447
ENSMUST00000144988 Meis1-005 protein_coding Mus_musculus 0 1358
ENSDART00000102576 meis1-001 protein_coding Danio_rerio 0 1027
ENSMUST00000177357 Meis1-007 nonsense_mediated_decay Mus_musculus 0 859
ENSMUST00000074285 Meis2-014 protein_coding Mus_musculus 0 846
ENSMUST00000110908 Meis2-013 protein_coding Mus_musculus 0 846
ENSMUST00000110906 Meis2-006 protein_coding Mus_musculus 0 760
ENSMUST00000110907 Meis2-001 protein_coding Mus_musculus 0 760
ENSMUST00000125722 Meis1-002 retained_intron Mus_musculus 0 606
ENSMUST00000151279 Meis2-010 processed_transcript Mus_musculus 0 472
ENSMUST00000137300 Meis1-003 retained_intron Mus_musculus 0 435
ENSDART00000140215 meis1-002 retained_intron Danio_rerio 0 399
ENSMUST00000120995 Meis2-003 processed_transcript Mus_musculus 0 379
ENSMUST00000118654 Meis2-002 retained_intron Mus_musculus 0 228

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