C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: syntaxin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496977 STX4-006 ENSG00000103496 9606 + 16:31033547-31038647 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000496977
Transcript ID Testis
ENST00000496977 6.122±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XW CIL_0001XW_0001 CGP 16:30989256-31042975
CIL_0001UH CIL_0001UH_0001 CGP 16:31032889-31074320

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033075 Stx4a-001 protein_coding Mus_musculus 0 872
ENSMUST00000156537 Stx4a-004 nonsense_mediated_decay Mus_musculus 0 852
ENSMUST00000121705 Stx4a-002 protein_coding Mus_musculus 0 756
ENSMUST00000142849 Stx4a-008 retained_intron Mus_musculus 0 466
ENSMUST00000138399 Stx4a-005 retained_intron Mus_musculus 0 340
ENSMUST00000152310 Stx4a-003 processed_transcript Mus_musculus 0 339
ENSMUST00000138294 Stx4a-006 retained_intron Mus_musculus 0 337
ENSMUST00000123180 Stx4a-007 retained_intron Mus_musculus 0 254

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