C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | PAN3 poly(A) specific ribonuclease subunit | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000503791  |
PAN3-004 |
ENSG00000152520 |
9606 | + |
13:28138506-28272313  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007MT | CIL_0007MT_0001 | UCNEbase | 13:27505095-28294517 |
| CIL_0000G0 | CIL_0000G0_0002 | CGP | 13:28003274-28295335 |
| CIL_0000G1 | CIL_0000G1_0002 | CGP | 13:28138506-28495128 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000176600
|
Pan3-002 | protein_coding | Mus_musculus | 0 | 2671 |
|
ENSMUST00000176753
|
Pan3-003 | protein_coding | Mus_musculus | 0 | 1694 |
|
ENSMUST00000031651
|
Pan3-001 | protein_coding | Mus_musculus | 0 | 1694 |
|
ENSMUST00000176596
|
Pan3-005 | nonsense_mediated_decay | Mus_musculus | 0 | 1441 |
|
ENSMUST00000177465
|
Pan3-004 | nonsense_mediated_decay | Mus_musculus | 0 | 1441 |
|
ENSMUST00000176466
|
Pan3-009 | nonsense_mediated_decay | Mus_musculus | 0 | 957 |
|
ENSMUST00000177328
|
Pan3-012 | retained_intron | Mus_musculus | 0 | 931 |
|
ENSMUST00000175807
|
Pan3-006 | protein_coding | Mus_musculus | 0 | 601 |
|
ENSDART00000048273
|
pan3-001 | protein_coding | Danio_rerio | 0 | 492 |
|
ENSMUST00000176202
|
Pan3-008 | retained_intron | Mus_musculus | 0 | 425 |
|
ENSMUST00000177327
|
Pan3-010 | retained_intron | Mus_musculus | 0 | 366 |
|
ENSMUST00000176806
|
Pan3-013 | retained_intron | Mus_musculus | 0 | 353 |
|
ENSMUST00000176505
|
Pan3-007 | retained_intron | Mus_musculus | 0 | 327 |
|
ENSMUST00000176817
|
Pan3-014 | processed_transcript | Mus_musculus | 0 | 261 |
|
ENSMUST00000176357
|
Pan3-011 | processed_transcript | Mus_musculus | 0 | 261 |
